Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC025164.1-201ENST00000496249 478 ntBASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 RNU2-30P-201ENST00000516209 141 ntBASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 AC233702.9-201ENST00000581528 203 ntBASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 BTBD10P1-201ENST00000549824 1352 ntBASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 HSPD1P14-201ENST00000432666 1618 ntBASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 AL049693.1-201ENST00000402760 611 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 RNA5SP113-201ENST00000410486 84 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 CNOT7P1-201ENST00000429006 852 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 CYCSP42-201ENST00000450823 238 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 AC006967.1-201ENST00000467608 589 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 IGLV2-34-201ENST00000490007 283 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 RPL36AP41-201ENST00000493820 306 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 OR7H2P-201ENST00000513483 306 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 RNA5SP446-201ENST00000515955 82 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 AC021733.2-201ENST00000518830 497 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 AC009643.1-201ENST00000532030 391 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 AC091042.1-201ENST00000579213 173 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 AC073091.2-201ENST00000603205 907 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 MFSD8-216ENST00000641147 4009 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 AL391684.1-202ENST00000641293 1636 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 MAPK10-320ENST00000641462 6696 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 AC010300.1-201ENST00000600671 5134 ntBASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
UPF3BQ9BZI7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 AC135352.1-201ENST00000506173 1418 ntBASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 RNA5SP151-201ENST00000365632 117 ntBASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 RPS3AP23-201ENST00000401762 784 ntBASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 RN7SKP167-201ENST00000411047 285 ntBASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 NRBF2P3-201ENST00000432731 865 ntBASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 RN7SL652P-201ENST00000577769 300 ntBASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 AC020910.2-201ENST00000603635 610 ntBASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 CASC19-204ENST00000641001 2055 ntBASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UPF3BQ9BZI7 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 LINC01355-201ENST00000566551 5444 ntBASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 MIR195-201ENST00000385194 87 ntBASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 MIR921-201ENST00000401133 56 ntBASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 CBX1P3-201ENST00000413296 527 ntBASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 AC140479.3-201ENST00000418944 1126 ntBASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.49□□□□□ -1.53
UPF3BQ9BZI7 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms