Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LRRC37A11P-202ENST00000579258 3717 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AL031123.2-201ENST00000563225 3325 ntBASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL25A1Q9BXS0 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 ERG-206ENST00000398911 4914 ntTSL 5 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 Y_RNA.557-201ENST00000384680 107 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 RPL7P58-201ENST00000402913 758 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AC009965.2-201ENST00000425328 970 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AL590762.4-201ENST00000425885 253 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 GAPDHP33-201ENST00000443168 1013 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 RPL32P28-201ENST00000443577 397 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AC097499.1-201ENST00000444277 208 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 PPIAP7-201ENST00000454070 489 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AL356981.1-201ENST00000454879 684 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 RPS27AP17-201ENST00000463344 455 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AC107398.1-201ENST00000486904 505 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 SMURF2P1-201ENST00000514992 481 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AP000620.1-201ENST00000527147 504 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AL163153.1-201ENST00000554223 283 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AC004805.3-201ENST00000603178 310 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AC004890.3-201ENST00000605566 1095 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AC016405.2-201ENST00000607393 312 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AC093913.1-201ENST00000614178 329 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AP006248.2-201ENST00000623309 592 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AP000766.1-201ENST00000561746 4140 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 AC092447.10-201ENST00000620607 1652 ntBASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL25A1Q9BXS0 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 USP13-203ENST00000496897 2747 ntTSL 2 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AC009108.3-201ENST00000602739 3515 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AL031123.3-201ENST00000623345 1837 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 HMGB1P5-201ENST00000255320 642 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 MIR550A3-201ENST00000390735 95 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 U8.14-201ENST00000390843 143 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 RNY4P36-201ENST00000391116 96 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AL157702.1-201ENST00000398764 426 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AL359694.1-201ENST00000403247 604 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 GAPDHP57-201ENST00000424400 585 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AC133104.1-201ENST00000429100 218 ntBASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.86□□□□□ -1.31
COL25A1Q9BXS0 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms