Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 uc_338.34-201ENST00000617467 174 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 AC137590.2-201ENST00000619709 240 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 AC067931.1-201ENST00000624190 671 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 SMG1P1-202ENST00000309865 4223 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 AC010329.1-201ENST00000593903 8328 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 AC121333.1-201ENST00000567488 2709 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC7.02□□□□□ -1.29
USB1Q9BQ65 CASC19-204ENST00000641001 2055 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USB1Q9BQ65 MROH3P-201ENST00000435735 2676 ntBASIC7.02□□□□□ -1.29
USB1Q9BQ65 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC008555.1-201ENST00000561778 2757 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 HYDIN2-203ENST00000614586 13885 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 HSPE1P11-201ENST00000339579 310 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 SNORA75B-201ENST00000384053 137 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 ARF4P3-201ENST00000397387 509 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 BX323014.1-201ENST00000412876 237 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 OR3B1P-201ENST00000437536 893 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 CBX1P4-201ENST00000439415 457 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 DNAJC19P5-201ENST00000443295 316 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 RPL4P2-201ENST00000447259 1282 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 NANOGP10-201ENST00000453325 895 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 RN7SL740P-201ENST00000467060 344 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 AL355032.1-201ENST00000472981 438 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 RPL7AP56-201ENST00000476420 791 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC055855.1-201ENST00000489563 579 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 RPS26P24-201ENST00000497656 331 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 GAPDHP38-201ENST00000503632 1002 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC097473.1-201ENST00000508142 408 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC138517.1-201ENST00000515724 568 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 RN7SKP14-201ENST00000516000 329 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 RNY3P15-201ENST00000516297 97 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 RNU6-256P-201ENST00000516747 97 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC022360.1-201ENST00000521058 340 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 MTND4P7-201ENST00000523876 130 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 DNM1P33-201ENST00000565222 270 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 MIR4775-201ENST00000581168 75 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC068790.3-201ENST00000602988 553 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC016727.2-201ENST00000603988 621 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC018462.2-201ENST00000605375 395 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 AC020634.1-201ENST00000608701 549 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 Z82243.1-201ENST00000609432 473 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms