Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTP4Q96DX8 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTP4Q96DX8 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTP4Q96DX8 DDX18P5-201ENST00000534547 1306 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTP4Q96DX8 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTP4Q96DX8 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTP4Q96DX8 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 U3.35-201ENST00000408405 208 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 MIR1271-201ENST00000408537 86 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 GTF2IP5-201ENST00000414608 731 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTP4Q96DX8 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 MTCO1P45-201ENST00000431457 267 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTP4Q96DX8 MTND2P21-201ENST00000436242 1042 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 RHOT1P3-201ENST00000436571 331 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 AC006466.1-201ENST00000438721 289 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 FABP5P6-201ENST00000510588 409 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTP4Q96DX8 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 AC004980.4-201ENST00000513375 203 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 RNA5SP392-201ENST00000516905 112 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 OR7E13P-201ENST00000526052 910 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 TVP23CP2-201ENST00000571473 623 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 HMGB1P51-201ENST00000605166 638 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 AC097478.2-201ENST00000610572 514 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 AC004241.3-201ENST00000611728 517 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 MIR8084-201ENST00000614105 89 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 AC015871.5-202ENST00000623252 701 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 AL353662.3-201ENST00000625131 237 ntBASIC5.04□□□□□ -1.6
RTP4Q96DX8 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTP4Q96DX8 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTP4Q96DX8 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTP4Q96DX8 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTP4Q96DX8 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RTP4Q96DX8 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTP4Q96DX8 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RTP4Q96DX8 AC112198.2-201ENST00000426589 6996 ntBASIC5.03□□□□□ -1.6
RTP4Q96DX8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RTP4Q96DX8 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTP4Q96DX8 AC008758.3-201ENST00000507003 1829 ntBASIC5.03□□□□□ -1.6
RTP4Q96DX8 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 RNA5SP345-201ENST00000410646 108 ntBASIC5.03□□□□□ -1.6
RTP4Q96DX8 AL356968.2-201ENST00000412769 1257 ntBASIC5.03□□□□□ -1.6
RTP4Q96DX8 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 FABP7P2-201ENST00000429946 379 ntBASIC5.03□□□□□ -1.6
RTP4Q96DX8 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 MTND1P31-201ENST00000449206 961 ntBASIC5.03□□□□□ -1.6
RTP4Q96DX8 AL009048.1-201ENST00000450437 298 ntBASIC5.03□□□□□ -1.6
RTP4Q96DX8 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 AL445433.1-201ENST00000457507 257 ntBASIC5.03□□□□□ -1.6
RTP4Q96DX8 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 TPT1P1-201ENST00000458495 518 ntBASIC5.03□□□□□ -1.6
RTP4Q96DX8 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTP4Q96DX8 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 AC034205.1-201ENST00000520621 638 ntBASIC5.03□□□□□ -1.6
RTP4Q96DX8 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 OR5AZ1P-201ENST00000527448 943 ntBASIC5.03□□□□□ -1.6
RTP4Q96DX8 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.03□□□□□ -1.6
RTP4Q96DX8 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms