Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.44□□□□□ -1.22
HLA-CQ95604 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.44□□□□□ -1.22
HLA-CQ95604 CDRT1-208ENST00000630868 794 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 AC135068.12-201ENST00000637370 931 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
HLA-CQ95604 CTAGE3P-201ENST00000454280 2404 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 AC131649.2-201ENST00000624925 4439 ntBASIC7.44□□□□□ -1.22
HLA-CQ95604 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-CQ95604 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
HLA-CQ95604 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
HLA-CQ95604 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.44□□□□□ -1.22
HLA-CQ95604 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-CQ95604 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-CQ95604 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-CQ95604 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.44□□□□□ -1.22
HLA-CQ95604 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-CQ95604 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.44□□□□□ -1.22
HLA-CQ95604 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
HLA-CQ95604 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-CQ95604 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 ZSWIM5P3-201ENST00000511265 2743 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC7.43□□□□□ -1.22
HLA-CQ95604 AF287957.1-201ENST00000607368 1595 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
HLA-CQ95604 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC7.43□□□□□ -1.22
HLA-CQ95604 Y_RNA.149-201ENST00000363558 117 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 Y_RNA.188-201ENST00000363952 111 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 RNU6-702P-201ENST00000364982 107 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 RNU6-657P-201ENST00000383904 107 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 RNU6-1013P-201ENST00000384180 107 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 Y_RNA.476-201ENST00000384347 108 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 CISD1P1-201ENST00000393907 327 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
HLA-CQ95604 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC7.43□□□□□ -1.22
HLA-CQ95604 RPS15AP9-201ENST00000439856 381 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 AL137792.2-201ENST00000443484 235 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC7.43□□□□□ -1.22
HLA-CQ95604 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.43□□□□□ -1.22
HLA-CQ95604 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC7.43□□□□□ -1.22
HLA-CQ95604 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.43□□□□□ -1.22
HLA-CQ95604 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC7.43□□□□□ -1.22
HLA-CQ95604 GMFBP1-201ENST00000467831 427 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 RPL23P10-201ENST00000468780 412 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 RPL31P50-201ENST00000471002 296 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 RN7SL751P-201ENST00000473281 284 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.43□□□□□ -1.22
HLA-CQ95604 RN7SL362P-201ENST00000494228 267 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 RPS4XP18-201ENST00000495480 763 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 AC025164.1-201ENST00000496249 478 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 AC091885.1-201ENST00000506658 268 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC7.43□□□□□ -1.22
HLA-CQ95604 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.43□□□□□ -1.22
HLA-CQ95604 RN7SKP2-201ENST00000517003 319 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 AF279873.1-201ENST00000523393 313 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 PPIAP6-201ENST00000557078 499 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.43□□□□□ -1.22
HLA-CQ95604 AC002310.3-201ENST00000569728 723 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
HLA-CQ95604 AP000654.2-201ENST00000605633 586 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 RNU6-89P-201ENST00000606519 100 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 uc_338.15-201ENST00000615470 191 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC7.43□□□□□ -1.22
HLA-CQ95604 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
HLA-CQ95604 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.43□□□□□ -1.22
HLA-CQ95604 OR2A20P-201ENST00000479887 2913 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.43□□□□□ -1.22
HLA-CQ95604 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.43□□□□□ -1.22
HLA-CQ95604 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 MAPK10-329ENST00000641555 2656 ntBASIC7.43□□□□□ -1.22
HLA-CQ95604 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-CQ95604 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 AL121949.2-201ENST00000403446 1548 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
HLA-CQ95604 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC7.42□□□□□ -1.22
HLA-CQ95604 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HLA-CQ95604 AC138409.1-201ENST00000505001 3598 ntBASIC7.42□□□□□ -1.22
HLA-CQ95604 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms