Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 U3.35-201ENST00000408405 208 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 RNA5SP36-201ENST00000410197 133 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 ASNSP4-201ENST00000511103 447 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC026367.3-201ENST00000619032 590 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC007342.8-201ENST00000623278 678 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC015908.5-201ENST00000623289 343 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC243960.7-201ENST00000623532 707 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 UQCRC2P1-201ENST00000417777 1332 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AC007389.2-201ENST00000434630 306 ntBASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 RPL23AP52-201ENST00000439311 478 ntBASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AC069061.3-201ENST00000582254 823 ntBASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 ZNF415P1-201ENST00000582279 1166 ntBASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 MIR7853-201ENST00000584820 132 ntBASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 BNIP3P41-202ENST00000616656 861 ntBASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 EIF2AP4-201ENST00000424793 1781 ntBASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AL672167.2-201ENST00000377164 879 ntBASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 RPL37P1-201ENST00000432310 284 ntBASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AC069304.1-201ENST00000491593 704 ntBASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 MIR3936-201ENST00000584304 110 ntBASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 RN7SKP74-201ENST00000362849 309 ntBASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AC140479.3-201ENST00000418944 1126 ntBASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 RPL23AP38-201ENST00000423801 469 ntBASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 DYNLL1P4-201ENST00000549314 266 ntBASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AL161729.3-201ENST00000603533 673 ntBASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 OR2BH1P-201ENST00000608850 864 ntBASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
ALMS1Q8TCU4 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 Z98745.1-201ENST00000402553 494 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 CYCSP10-201ENST00000417973 294 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 NANOGP10-201ENST00000453325 895 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AC021193.1-201ENST00000511607 420 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AC015912.2-201ENST00000571053 181 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 FAM27D1-201ENST00000612308 341 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 ARL4AP4-201ENST00000434170 518 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 RPL23AP43-201ENST00000446445 471 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms