Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.85□□□□□ -1.31
VPS8Q8N3P4 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.85□□□□□ -1.31
VPS8Q8N3P4 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.85□□□□□ -1.31
VPS8Q8N3P4 AC091979.2-201ENST00000607514 214 ntBASIC6.85□□□□□ -1.31
VPS8Q8N3P4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
VPS8Q8N3P4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
VPS8Q8N3P4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VPS8Q8N3P4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VPS8Q8N3P4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VPS8Q8N3P4 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 RNU1-20P-201ENST00000363314 162 ntBASIC6.84□□□□□ -1.31
VPS8Q8N3P4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 NPM1P33-201ENST00000438918 872 ntBASIC6.84□□□□□ -1.31
VPS8Q8N3P4 AC091167.1-201ENST00000492017 396 ntBASIC6.84□□□□□ -1.31
VPS8Q8N3P4 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 AL592156.1-201ENST00000508758 304 ntBASIC6.84□□□□□ -1.31
VPS8Q8N3P4 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 PSMB7P1-201ENST00000556349 514 ntBASIC6.84□□□□□ -1.31
VPS8Q8N3P4 AC124068.1-201ENST00000563131 678 ntBASIC6.84□□□□□ -1.31
VPS8Q8N3P4 ATP5J2P6-201ENST00000565203 266 ntBASIC6.84□□□□□ -1.31
VPS8Q8N3P4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
VPS8Q8N3P4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
VPS8Q8N3P4 AL078604.1-201ENST00000404609 466 ntBASIC6.84□□□□□ -1.32
VPS8Q8N3P4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.84□□□□□ -1.32
VPS8Q8N3P4 UBTFL3-201ENST00000418934 1024 ntBASIC6.84□□□□□ -1.32
VPS8Q8N3P4 AC004448.2-201ENST00000422360 586 ntBASIC6.84□□□□□ -1.32
VPS8Q8N3P4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.84□□□□□ -1.32
VPS8Q8N3P4 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.84□□□□□ -1.32
VPS8Q8N3P4 UQCRHP4-201ENST00000471686 272 ntBASIC6.84□□□□□ -1.32
VPS8Q8N3P4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.84□□□□□ -1.32
VPS8Q8N3P4 UBTFL6-201ENST00000477929 1024 ntBASIC6.84□□□□□ -1.32
VPS8Q8N3P4 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.32
VPS8Q8N3P4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC6.84□□□□□ -1.32
VPS8Q8N3P4 RNA5SP464-201ENST00000516251 108 ntBASIC6.84□□□□□ -1.32
VPS8Q8N3P4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.84□□□□□ -1.32
VPS8Q8N3P4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
VPS8Q8N3P4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.32
VPS8Q8N3P4 AP001642.1-201ENST00000624727 2117 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
VPS8Q8N3P4 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VPS8Q8N3P4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VPS8Q8N3P4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VPS8Q8N3P4 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VPS8Q8N3P4 AL138820.1-201ENST00000617901 5305 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VPS8Q8N3P4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
VPS8Q8N3P4 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
VPS8Q8N3P4 MIR383-201ENST00000362257 73 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 AL356967.1-201ENST00000406305 431 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 AL356968.2-201ENST00000412769 1257 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 OR8G2P-201ENST00000412796 908 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VPS8Q8N3P4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.83□□□□□ -1.32
VPS8Q8N3P4 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 RPS27AP15-201ENST00000447672 466 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 AC009963.2-201ENST00000453431 138 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.83□□□□□ -1.32
VPS8Q8N3P4 ATP1B1P1-201ENST00000509767 915 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 MRPL49P2-201ENST00000521066 465 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 AP001804.2-201ENST00000533932 910 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.83□□□□□ -1.32
VPS8Q8N3P4 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VPS8Q8N3P4 MIR3939-201ENST00000582614 106 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 AL161729.3-201ENST00000603533 673 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 FAM27D1-201ENST00000612308 341 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 AC006338.2-201ENST00000616864 791 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 MIR6830-201ENST00000636015 70 ntBASIC6.83□□□□□ -1.32
VPS8Q8N3P4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VPS8Q8N3P4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
VPS8Q8N3P4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VPS8Q8N3P4 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
VPS8Q8N3P4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
VPS8Q8N3P4 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VPS8Q8N3P4 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
VPS8Q8N3P4 RNU1-14P-201ENST00000362759 152 ntBASIC6.82□□□□□ -1.32
VPS8Q8N3P4 MIR1911-201ENST00000410783 80 ntBASIC6.82□□□□□ -1.32
VPS8Q8N3P4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC6.82□□□□□ -1.32
VPS8Q8N3P4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC6.82□□□□□ -1.32
VPS8Q8N3P4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.82□□□□□ -1.32
VPS8Q8N3P4 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.82□□□□□ -1.32
VPS8Q8N3P4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.82□□□□□ -1.32
VPS8Q8N3P4 AC010374.1-201ENST00000503762 1237 ntBASIC6.82□□□□□ -1.32
VPS8Q8N3P4 RNA5SP360-201ENST00000516555 118 ntBASIC6.82□□□□□ -1.32
VPS8Q8N3P4 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.82□□□□□ -1.32
VPS8Q8N3P4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.82□□□□□ -1.32
VPS8Q8N3P4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms