Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 RPL7P45-201ENST00000455851 743 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC011225.1-201ENST00000457751 369 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AL591473.1-201ENST00000464297 313 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 MTCO3P35-201ENST00000485582 781 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 HMGB1P40-201ENST00000525121 540 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC027544.3-201ENST00000535082 757 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 RPL10P14-201ENST00000565265 298 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC023824.3-201ENST00000569003 562 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC245036.5-201ENST00000596330 847 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 SUGT1P3-202ENST00000604259 383 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC002487.1-201ENST00000604565 994 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 OR8G7P-201ENST00000616658 848 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC037198.3-201ENST00000616754 526 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC008115.4-201ENST00000619780 775 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC011330.2-201ENST00000621680 635 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 MIR8080-201ENST00000622224 89 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC073869.10-201ENST00000642016 354 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 AC000123.3-201ENST00000624029 4975 ntBASIC4.84□□□□□ -1.63
CLIP4Q8N3C7 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
CLIP4Q8N3C7 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.84□□□□□ -1.64
CLIP4Q8N3C7 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
CLIP4Q8N3C7 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLIP4Q8N3C7 AC063976.2-201ENST00000425667 3556 ntBASIC4.84□□□□□ -1.64
CLIP4Q8N3C7 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLIP4Q8N3C7 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
CLIP4Q8N3C7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CLIP4Q8N3C7 MTND5P11-201ENST00000511037 1812 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC012321.1-201ENST00000561622 1588 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 BTBD10P1-201ENST00000549824 1352 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 RNU6-1005P-201ENST00000384519 107 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 MIR105-1-201ENST00000385222 81 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 RPL5P19-201ENST00000404228 893 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 ATF1P1-201ENST00000406040 927 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AL390774.1-201ENST00000411924 246 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC008173.1-201ENST00000418901 264 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 MTCYBP7-201ENST00000419540 1134 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 FTLP19-201ENST00000433300 394 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 USP9YP24-201ENST00000434374 697 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 USP9YP17-201ENST00000444617 696 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 RN7SL189P-201ENST00000468631 289 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 RPL7P40-201ENST00000481703 745 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 RN7SL547P-201ENST00000490793 290 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 RPL5P23-201ENST00000496040 868 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC082651.2-201ENST00000496833 166 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 RN7SL466P-201ENST00000497546 295 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC021146.7-201ENST00000509604 775 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 MTATP6P1-201ENST00000514057 681 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 RNU6-941P-201ENST00000516346 108 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 OR10V3P-201ENST00000525712 725 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 MTATP6P15-201ENST00000527233 835 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC006349.1-201ENST00000555526 235 ntBASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.83□□□□□ -1.64
CLIP4Q8N3C7 AC021483.2-201ENST00000567415 758 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms