Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC010928.1-201ENST00000592477 1447 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 MFSD8-220ENST00000641243 1422 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SYNE4Q8N205 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
SYNE4Q8N205 HSPD1P14-201ENST00000432666 1618 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SYNE4Q8N205 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SYNE4Q8N205 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SYNE4Q8N205 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SYNE4Q8N205 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SYNE4Q8N205 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SYNE4Q8N205 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SYNE4Q8N205 Y_RNA.126-201ENST00000363382 111 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SYNE4Q8N205 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 MTND2P5-201ENST00000432656 1006 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 THAP5P1-201ENST00000439089 262 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC023271.1-201ENST00000445936 1090 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 MOB1AP2-201ENST00000446060 614 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 RBMY2TP-201ENST00000451162 947 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC011005.3-201ENST00000491624 395 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC091435.1-201ENST00000505442 584 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC069306.1-201ENST00000507006 843 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC108157.1-201ENST00000510511 539 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 RNU6-491P-201ENST00000516099 110 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 AP003033.1-201ENST00000527244 415 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 AP001880.2-201ENST00000538233 448 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SYNE4Q8N205 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 OR4U1P-201ENST00000554958 912 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 GLRXP2-201ENST00000555594 321 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 MIR7853-201ENST00000584820 132 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 AL365400.2-201ENST00000605604 902 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC004241.3-201ENST00000611728 517 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC231759.1-201ENST00000616455 597 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC013470.4-201ENST00000619978 986 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC068831.8-201ENST00000620171 435 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC091932.2-201ENST00000623014 291 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC099654.2-201ENST00000433031 1980 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 AL355488.2-201ENST00000609909 2850 ntBASIC6.25□□□□□ -1.41
SYNE4Q8N205 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SYNE4Q8N205 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.25□□□□□ -1.41
SYNE4Q8N205 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SYNE4Q8N205 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SYNE4Q8N205 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SYNE4Q8N205 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SYNE4Q8N205 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SYNE4Q8N205 DDX43P2-201ENST00000604753 1354 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SYNE4Q8N205 MIR421-201ENST00000365696 85 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 AL390316.1-201ENST00000406279 553 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 NPM1P26-201ENST00000426339 738 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC013262.1-201ENST00000426710 252 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC009238.2-201ENST00000431026 355 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 AL359265.2-201ENST00000434367 631 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC090018.1-201ENST00000434369 367 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 MTND1P34-201ENST00000438556 671 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC016772.1-201ENST00000444170 1261 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 HMGB1P4-201ENST00000455362 567 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 RPS24P16-201ENST00000497294 392 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC090058.1-201ENST00000498788 435 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 PCNAP1-201ENST00000505363 709 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 EMP1-206ENST00000537612 505 ntTSL 3 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 AL132857.1-201ENST00000555180 708 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 TVP23CP2-201ENST00000571473 623 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms