Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 RNA5SP477-201ENST00000362639 119 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 RNU6-1339P-201ENST00000363574 91 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 RN7SKP59-201ENST00000410520 314 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AC116036.1-201ENST00000412199 367 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 RPL30P16-201ENST00000419341 429 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 MTCO1P54-201ENST00000430139 712 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 Z74696.2-201ENST00000436514 498 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 TRIM60P18-201ENST00000441518 828 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 DDX39BP2-208ENST00000453923 258 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 SUMO2P2-201ENST00000456482 255 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AC104763.1-201ENST00000475274 360 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 GAPDHP39-201ENST00000481866 979 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 RPL9P33-201ENST00000484311 566 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AC109486.1-201ENST00000486833 374 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 RPS26P24-201ENST00000497656 331 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 RPL7L1P4-201ENST00000513004 707 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 Y_RNA.667-201ENST00000516212 107 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AC087808.1-201ENST00000520501 361 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 IGJP1-201ENST00000522682 475 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AP004609.2-201ENST00000532177 190 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AC087883.1-201ENST00000551882 391 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AC083899.3-201ENST00000603413 594 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AC011453.2-201ENST00000603737 729 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AC138749.5-201ENST00000611461 208 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 MIR6793-201ENST00000612376 63 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AL136228.1-201ENST00000622221 319 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AC087565.3-203ENST00000641018 837 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AC106872.5-201ENST00000508856 1416 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 AL353743.4-201ENST00000422653 1547 ntBASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TRIM48Q8IWZ4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 RNU6-666P-201ENST00000363499 107 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 RN7SKP15-201ENST00000364742 309 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 RNU4-7P-201ENST00000364758 141 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 RNU6-98P-201ENST00000384173 107 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AL360271.1-201ENST00000395679 510 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 RNU6-77P-201ENST00000410554 91 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 TPT1P2-201ENST00000413105 503 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 NMD3P2-201ENST00000421815 761 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 MRPS10P2-201ENST00000431226 381 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC009263.1-201ENST00000441193 1239 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AL512593.1-201ENST00000444758 779 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC023271.1-201ENST00000445936 1090 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 COX6CP18-201ENST00000448769 222 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AL358876.1-201ENST00000453364 1075 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 SNRPGP9-201ENST00000456025 225 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 RPL5P24-201ENST00000463742 885 ntBASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM48Q8IWZ4 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms