Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.51□□□□□ -1.53
RFX7Q2KHR2 AC020937.1-201ENST00000519677 1013 ntBASIC5.51□□□□□ -1.53
RFX7Q2KHR2 IGKV2D-10-201ENST00000520194 281 ntBASIC5.51□□□□□ -1.53
RFX7Q2KHR2 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.51□□□□□ -1.53
RFX7Q2KHR2 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.51□□□□□ -1.53
RFX7Q2KHR2 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.51□□□□□ -1.53
RFX7Q2KHR2 BPIFA4P-203ENST00000603168 689 ntBASIC5.51□□□□□ -1.53
RFX7Q2KHR2 AP002360.3-201ENST00000607673 710 ntBASIC5.51□□□□□ -1.53
RFX7Q2KHR2 AC005086.4-201ENST00000623065 213 ntBASIC5.51□□□□□ -1.53
RFX7Q2KHR2 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.51□□□□□ -1.53
RFX7Q2KHR2 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFX7Q2KHR2 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RFX7Q2KHR2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 PCAT14-202ENST00000627127 3935 ntBASIC5.5□□□□□ -1.53
RFX7Q2KHR2 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 AC009951.1-201ENST00000623674 2614 ntBASIC5.5□□□□□ -1.53
RFX7Q2KHR2 RPL21P108-201ENST00000413857 481 ntBASIC5.5□□□□□ -1.53
RFX7Q2KHR2 GNG5P5-201ENST00000420444 220 ntBASIC5.5□□□□□ -1.53
RFX7Q2KHR2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 RPL23AP24-201ENST00000458203 385 ntBASIC5.5□□□□□ -1.53
RFX7Q2KHR2 AC109327.1-201ENST00000471666 403 ntBASIC5.5□□□□□ -1.53
RFX7Q2KHR2 RPL23AP65-201ENST00000475608 468 ntBASIC5.5□□□□□ -1.53
RFX7Q2KHR2 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 CYCSP28-201ENST00000534284 321 ntBASIC5.5□□□□□ -1.53
RFX7Q2KHR2 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 AL020997.2-201ENST00000602607 184 ntBASIC5.5□□□□□ -1.53
RFX7Q2KHR2 AC010201.1-201ENST00000605051 540 ntBASIC5.5□□□□□ -1.53
RFX7Q2KHR2 AL133243.1-201ENST00000614487 366 ntBASIC5.5□□□□□ -1.53
RFX7Q2KHR2 AC002044.3-201ENST00000623314 541 ntBASIC5.5□□□□□ -1.53
RFX7Q2KHR2 MIR6830-201ENST00000636015 70 ntBASIC5.5□□□□□ -1.53
RFX7Q2KHR2 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RFX7Q2KHR2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 TCP1P3-201ENST00000414406 1498 ntBASIC5.49□□□□□ -1.53
RFX7Q2KHR2 AC120036.2-201ENST00000509729 1474 ntBASIC5.49□□□□□ -1.53
RFX7Q2KHR2 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 RN7SKP74-201ENST00000362849 309 ntBASIC5.49□□□□□ -1.53
RFX7Q2KHR2 SNORD96B-201ENST00000386148 79 ntBASIC5.49□□□□□ -1.53
RFX7Q2KHR2 NACAP7-201ENST00000407371 609 ntBASIC5.49□□□□□ -1.53
RFX7Q2KHR2 PPIAP13-201ENST00000434706 478 ntBASIC5.49□□□□□ -1.53
RFX7Q2KHR2 FTH1P16-201ENST00000435241 552 ntBASIC5.49□□□□□ -1.53
RFX7Q2KHR2 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 AC068993.1-201ENST00000546724 589 ntBASIC5.49□□□□□ -1.53
RFX7Q2KHR2 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 AC023575.1-201ENST00000580510 358 ntBASIC5.49□□□□□ -1.53
RFX7Q2KHR2 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 AC090948.1-201ENST00000607464 549 ntBASIC5.49□□□□□ -1.53
RFX7Q2KHR2 AC245389.2-201ENST00000616023 576 ntBASIC5.49□□□□□ -1.53
RFX7Q2KHR2 AC242843.1-201ENST00000618702 573 ntBASIC5.49□□□□□ -1.53
RFX7Q2KHR2 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RFX7Q2KHR2 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RFX7Q2KHR2 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.48□□□□□ -1.53
RFX7Q2KHR2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFX7Q2KHR2 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFX7Q2KHR2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFX7Q2KHR2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFX7Q2KHR2 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFX7Q2KHR2 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFX7Q2KHR2 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFX7Q2KHR2 OR4K17-201ENST00000315543 1032 ntBASIC5.48□□□□□ -1.53
RFX7Q2KHR2 RPL17P36-201ENST00000420302 549 ntBASIC5.48□□□□□ -1.53
RFX7Q2KHR2 AC062016.2-201ENST00000420950 676 ntBASIC5.48□□□□□ -1.53
RFX7Q2KHR2 AL356387.2-201ENST00000422272 243 ntBASIC5.48□□□□□ -1.53
RFX7Q2KHR2 NDUFA5P1-201ENST00000433858 341 ntBASIC5.48□□□□□ -1.53
RFX7Q2KHR2 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFX7Q2KHR2 AC020898.1-201ENST00000474167 787 ntBASIC5.48□□□□□ -1.53
RFX7Q2KHR2 DEFB109F-201ENST00000491870 277 ntBASIC5.48□□□□□ -1.53
RFX7Q2KHR2 AC015795.1-201ENST00000513669 327 ntBASIC5.48□□□□□ -1.53
RFX7Q2KHR2 AC090151.1-201ENST00000520784 730 ntBASIC5.48□□□□□ -1.53
RFX7Q2KHR2 AP000827.1-201ENST00000527814 258 ntBASIC5.48□□□□□ -1.53
RFX7Q2KHR2 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
RFX7Q2KHR2 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms