Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.38□□□□□ -1.55
GABPAQ06546 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.38□□□□□ -1.55
GABPAQ06546 TCEA1P3-201ENST00000443005 880 ntBASIC5.38□□□□□ -1.55
GABPAQ06546 MRPL48P1-201ENST00000445390 636 ntBASIC5.38□□□□□ -1.55
GABPAQ06546 TDGF1P1-201ENST00000445734 527 ntBASIC5.38□□□□□ -1.55
GABPAQ06546 MTND6P5-201ENST00000448266 512 ntBASIC5.38□□□□□ -1.55
GABPAQ06546 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.38□□□□□ -1.55
GABPAQ06546 RPL21P126-201ENST00000470049 478 ntBASIC5.38□□□□□ -1.55
GABPAQ06546 AC020890.1-201ENST00000491837 504 ntBASIC5.38□□□□□ -1.55
GABPAQ06546 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.38□□□□□ -1.55
GABPAQ06546 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.38□□□□□ -1.55
GABPAQ06546 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.38□□□□□ -1.55
GABPAQ06546 AC015912.2-201ENST00000571053 181 ntBASIC5.38□□□□□ -1.55
GABPAQ06546 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.38□□□□□ -1.55
GABPAQ06546 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.38□□□□□ -1.55
GABPAQ06546 AL590392.1-201ENST00000604960 446 ntBASIC5.38□□□□□ -1.55
GABPAQ06546 AC090948.1-201ENST00000607464 549 ntBASIC5.38□□□□□ -1.55
GABPAQ06546 AL731566.2-201ENST00000618971 317 ntBASIC5.38□□□□□ -1.55
GABPAQ06546 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
GABPAQ06546 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
GABPAQ06546 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.38□□□□□ -1.55
GABPAQ06546 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
GABPAQ06546 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
GABPAQ06546 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GABPAQ06546 CPHL1P-201ENST00000461341 3407 ntBASIC5.38□□□□□ -1.55
GABPAQ06546 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
GABPAQ06546 SALL4P2-201ENST00000423288 2910 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GABPAQ06546 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
GABPAQ06546 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
GABPAQ06546 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.37□□□□□ -1.55
GABPAQ06546 MTHFD2P5-201ENST00000320415 844 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 RNU1-130P-201ENST00000363930 160 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 TMSB10P2-201ENST00000416049 131 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.37□□□□□ -1.55
GABPAQ06546 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GABPAQ06546 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.37□□□□□ -1.55
GABPAQ06546 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.37□□□□□ -1.55
GABPAQ06546 GSTA7P-201ENST00000438425 448 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 FHP1-201ENST00000442741 703 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 RPL23AP43-201ENST00000446445 471 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 RPL23AP24-201ENST00000458203 385 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.37□□□□□ -1.55
GABPAQ06546 AC023424.1-201ENST00000496058 459 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.37□□□□□ -1.55
GABPAQ06546 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GABPAQ06546 RNU6-551P-201ENST00000516661 103 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.37□□□□□ -1.55
GABPAQ06546 OR8A2P-201ENST00000528631 952 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.37□□□□□ -1.55
GABPAQ06546 AC011270.1-201ENST00000558606 583 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.37□□□□□ -1.55
GABPAQ06546 MTATP6P25-201ENST00000574491 261 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.37□□□□□ -1.55
GABPAQ06546 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.37□□□□□ -1.55
GABPAQ06546 AP001160.4-201ENST00000596971 382 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 GMCL1P2-201ENST00000605230 823 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.37□□□□□ -1.55
GABPAQ06546 MLECP1-201ENST00000615893 709 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 MIR6891-201ENST00000618788 93 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 AL035461.2-201ENST00000619201 524 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GABPAQ06546 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GABPAQ06546 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.37□□□□□ -1.55
GABPAQ06546 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.37□□□□□ -1.55
GABPAQ06546 AC005261.6-201ENST00000623072 1387 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.37□□□□□ -1.55
GABPAQ06546 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GABPAQ06546 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GABPAQ06546 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GABPAQ06546 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
GABPAQ06546 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.37□□□□□ -1.55
GABPAQ06546 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
GABPAQ06546 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GABPAQ06546 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GABPAQ06546 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
GABPAQ06546 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
GABPAQ06546 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GABPAQ06546 Y_RNA.62-201ENST00000362840 99 ntBASIC5.36□□□□□ -1.55
GABPAQ06546 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GABPAQ06546 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.36□□□□□ -1.55
GABPAQ06546 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GABPAQ06546 CBX1P3-201ENST00000413296 527 ntBASIC5.36□□□□□ -1.55
GABPAQ06546 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.36□□□□□ -1.55
GABPAQ06546 HMGN2P27-201ENST00000427352 270 ntBASIC5.36□□□□□ -1.55
GABPAQ06546 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.36□□□□□ -1.55
GABPAQ06546 CBX1P1-201ENST00000440184 427 ntBASIC5.36□□□□□ -1.55
GABPAQ06546 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.36□□□□□ -1.55
GABPAQ06546 AC053481.1-201ENST00000467217 306 ntBASIC5.36□□□□□ -1.55
GABPAQ06546 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.36□□□□□ -1.55
GABPAQ06546 AC083829.1-201ENST00000503756 657 ntBASIC5.36□□□□□ -1.55
GABPAQ06546 AK4P6-201ENST00000505168 528 ntBASIC5.36□□□□□ -1.55
GABPAQ06546 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.36□□□□□ -1.55
GABPAQ06546 AC010476.1-201ENST00000519111 851 ntBASIC5.36□□□□□ -1.55
GABPAQ06546 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.36□□□□□ -1.55
GABPAQ06546 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.36□□□□□ -1.55
GABPAQ06546 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.36□□□□□ -1.55
GABPAQ06546 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.36□□□□□ -1.55
GABPAQ06546 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.36□□□□□ -1.55
GABPAQ06546 AC011944.2-201ENST00000624440 683 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms