Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC3.71□□□□□ -1.82
SSBP1Q04837 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.71□□□□□ -1.82
SSBP1Q04837 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.71□□□□□ -1.82
SSBP1Q04837 AC016831.4-201ENST00000438302 307 ntBASIC3.71□□□□□ -1.82
SSBP1Q04837 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.71□□□□□ -1.82
SSBP1Q04837 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.71□□□□□ -1.82
SSBP1Q04837 RPL23AP43-201ENST00000446445 471 ntBASIC3.71□□□□□ -1.82
SSBP1Q04837 RBMY2TP-201ENST00000451162 947 ntBASIC3.71□□□□□ -1.82
SSBP1Q04837 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC3.71□□□□□ -1.82
SSBP1Q04837 AL133477.1-201ENST00000457472 514 ntBASIC3.71□□□□□ -1.82
SSBP1Q04837 RN7SL172P-201ENST00000460535 303 ntBASIC3.71□□□□□ -1.82
SSBP1Q04837 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.71□□□□□ -1.82
SSBP1Q04837 RPL37AP8-201ENST00000494116 276 ntBASIC3.71□□□□□ -1.82
SSBP1Q04837 AC072052.1-201ENST00000496556 306 ntBASIC3.71□□□□□ -1.82
SSBP1Q04837 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
SSBP1Q04837 AC109458.1-201ENST00000508858 316 ntBASIC3.71□□□□□ -1.82
SSBP1Q04837 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.71□□□□□ -1.82
SSBP1Q04837 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SSBP1Q04837 AC024405.1-201ENST00000532521 1042 ntBASIC3.71□□□□□ -1.82
SSBP1Q04837 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSBP1Q04837 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.71□□□□□ -1.82
SSBP1Q04837 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.71□□□□□ -1.82
SSBP1Q04837 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC3.71□□□□□ -1.82
SSBP1Q04837 AC020914.4-201ENST00000597690 277 ntBASIC3.71□□□□□ -1.82
SSBP1Q04837 AL023881.1-201ENST00000621088 301 ntBASIC3.71□□□□□ -1.82
SSBP1Q04837 AC112694.2-201ENST00000623697 768 ntBASIC3.71□□□□□ -1.82
SSBP1Q04837 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSBP1Q04837 AC083899.2-201ENST00000423285 1376 ntBASIC3.71□□□□□ -1.82
SSBP1Q04837 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSBP1Q04837 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSBP1Q04837 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSBP1Q04837 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSBP1Q04837 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.71□□□□□ -1.82
SSBP1Q04837 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSBP1Q04837 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
SSBP1Q04837 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SSBP1Q04837 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
SSBP1Q04837 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SSBP1Q04837 FAM3C2-201ENST00000312214 681 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSBP1Q04837 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSBP1Q04837 SNORD66.1-201ENST00000391230 76 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 RPL23AP48-201ENST00000406913 488 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSBP1Q04837 EIF1P3-201ENST00000423841 334 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC3.7□□□□□ -1.82
SSBP1Q04837 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.7□□□□□ -1.82
SSBP1Q04837 RPL23AP89-201ENST00000439324 255 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 UBE2V1P3-201ENST00000439651 417 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 AL356535.1-201ENST00000440335 398 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 YWHAQP9-201ENST00000445891 512 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 OR1H1P-201ENST00000448731 937 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.7□□□□□ -1.82
SSBP1Q04837 AC079841.1-201ENST00000481228 950 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 AC146944.2-203ENST00000502493 354 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 AL592156.1-201ENST00000508758 304 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.7□□□□□ -1.82
SSBP1Q04837 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC3.7□□□□□ -1.82
SSBP1Q04837 AC139495.1-202ENST00000513164 354 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 AP002981.1-201ENST00000517692 975 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC3.7□□□□□ -1.82
SSBP1Q04837 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 GTF2IP11-201ENST00000526931 420 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 AC005363.1-201ENST00000530779 351 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 GCSHP4-201ENST00000538792 439 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.7□□□□□ -1.82
SSBP1Q04837 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.7□□□□□ -1.82
SSBP1Q04837 AC004825.1-201ENST00000555068 586 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.7□□□□□ -1.82
SSBP1Q04837 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.7□□□□□ -1.82
SSBP1Q04837 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSBP1Q04837 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.7□□□□□ -1.82
SSBP1Q04837 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 AC008521.2-201ENST00000591021 259 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 AC133552.5-201ENST00000604266 540 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 AC004477.3-201ENST00000614061 590 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 AC026368.1-201ENST00000614934 690 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.7□□□□□ -1.82
SSBP1Q04837 A2MP1-204ENST00000566278 4130 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 AC112255.1-201ENST00000624070 2493 ntBASIC3.7□□□□□ -1.82
SSBP1Q04837 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSBP1Q04837 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSBP1Q04837 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.7□□□□□ -1.82
SSBP1Q04837 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSBP1Q04837 BDP1P-201ENST00000582658 1990 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSBP1Q04837 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.69□□□□□ -1.82
SSBP1Q04837 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSBP1Q04837 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSBP1Q04837 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SSBP1Q04837 RNA5SP322-201ENST00000363617 119 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 RNU1-89P-201ENST00000384592 164 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 MIR223-201ENST00000385204 110 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.69□□□□□ -1.82
SSBP1Q04837 AL445213.1-201ENST00000412589 747 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 RSU1P3-201ENST00000412878 835 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 AL513325.1-201ENST00000417716 1034 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 BX510359.2-201ENST00000417920 305 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 USP12PY-201ENST00000427677 1064 ntBASIC3.69□□□□□ -1.82
SSBP1Q04837 OR2B7P-201ENST00000429302 934 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms