Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH6P55285 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH6P55285 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH6P55285 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.81□□□□□ -1.64
CDH6P55285 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.81□□□□□ -1.64
CDH6P55285 AC104297.1-201ENST00000393779 870 ntBASIC4.81□□□□□ -1.64
CDH6P55285 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH6P55285 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH6P55285 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH6P55285 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.81□□□□□ -1.64
CDH6P55285 LYPLA1P1-201ENST00000434514 622 ntBASIC4.81□□□□□ -1.64
CDH6P55285 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH6P55285 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH6P55285 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH6P55285 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH6P55285 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH6P55285 MTCYBP14-201ENST00000457471 715 ntBASIC4.81□□□□□ -1.64
CDH6P55285 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH6P55285 AC083982.1-201ENST00000485679 344 ntBASIC4.81□□□□□ -1.64
CDH6P55285 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH6P55285 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH6P55285 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH6P55285 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH6P55285 MTND2P13-201ENST00000577438 1039 ntBASIC4.81□□□□□ -1.64
CDH6P55285 AC115989.2-201ENST00000578640 563 ntBASIC4.81□□□□□ -1.64
CDH6P55285 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH6P55285 SNORD91B-202ENST00000608459 222 ntBASIC4.81□□□□□ -1.64
CDH6P55285 FAM25E-202ENST00000608562 189 ntBASIC4.81□□□□□ -1.64
CDH6P55285 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH6P55285 AL391684.1-202ENST00000641293 1636 ntBASIC4.81□□□□□ -1.64
CDH6P55285 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH6P55285 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH6P55285 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH6P55285 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CDH6P55285 AC120338.1-201ENST00000625074 1541 ntBASIC4.81□□□□□ -1.64
CDH6P55285 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH6P55285 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH6P55285 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH6P55285 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH6P55285 NEAT1-202ENST00000501122 22743 ntBASIC4.8□□□□□ -1.64
CDH6P55285 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CDH6P55285 AC135352.1-201ENST00000506173 1418 ntBASIC4.8□□□□□ -1.64
CDH6P55285 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH6P55285 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH6P55285 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH6P55285 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CDH6P55285 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CDH6P55285 AL590240.1-201ENST00000334118 313 ntBASIC4.8□□□□□ -1.64
CDH6P55285 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH6P55285 RNU6-697P-201ENST00000363348 107 ntBASIC4.8□□□□□ -1.64
CDH6P55285 MIR921-201ENST00000401133 56 ntBASIC4.8□□□□□ -1.64
CDH6P55285 Z98745.1-201ENST00000402553 494 ntBASIC4.8□□□□□ -1.64
CDH6P55285 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.8□□□□□ -1.64
CDH6P55285 MTND6P18-201ENST00000439477 513 ntBASIC4.8□□□□□ -1.64
CDH6P55285 MTCO3P17-201ENST00000443775 513 ntBASIC4.8□□□□□ -1.64
CDH6P55285 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH6P55285 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH6P55285 MTND4LP12-201ENST00000448237 295 ntBASIC4.8□□□□□ -1.64
CDH6P55285 NPM1P39-201ENST00000449818 867 ntBASIC4.8□□□□□ -1.64
CDH6P55285 AC104763.1-201ENST00000475274 360 ntBASIC4.8□□□□□ -1.64
CDH6P55285 AC011005.3-201ENST00000491624 395 ntBASIC4.8□□□□□ -1.64
CDH6P55285 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH6P55285 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.8□□□□□ -1.64
CDH6P55285 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH6P55285 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CDH6P55285 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH6P55285 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH6P55285 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH6P55285 AC098935.2-201ENST00000604222 466 ntBASIC4.8□□□□□ -1.64
CDH6P55285 AL137246.1-201ENST00000607072 977 ntBASIC4.8□□□□□ -1.64
CDH6P55285 AL135786.2-201ENST00000608422 615 ntBASIC4.8□□□□□ -1.64
CDH6P55285 AP005212.4-201ENST00000614206 710 ntBASIC4.8□□□□□ -1.64
CDH6P55285 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CDH6P55285 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH6P55285 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CDH6P55285 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH6P55285 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH6P55285 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH6P55285 MAPK10-286ENST00000641208 8747 ntBASIC4.8□□□□□ -1.64
CDH6P55285 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CDH6P55285 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CDH6P55285 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH6P55285 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CDH6P55285 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CDH6P55285 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CDH6P55285 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH6P55285 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH6P55285 A2MP1-204ENST00000566278 4130 ntBASIC4.79□□□□□ -1.64
CDH6P55285 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH6P55285 AL512430.2-201ENST00000406786 339 ntBASIC4.79□□□□□ -1.64
CDH6P55285 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH6P55285 ATG4AP1-201ENST00000416893 538 ntBASIC4.79□□□□□ -1.64
CDH6P55285 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH6P55285 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH6P55285 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH6P55285 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH6P55285 AL935212.3-201ENST00000450729 284 ntBASIC4.79□□□□□ -1.64
CDH6P55285 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH6P55285 ISCUP1-201ENST00000454451 448 ntBASIC4.79□□□□□ -1.64
CDH6P55285 AL133372.1-201ENST00000493565 745 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms