Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.57□□□□□ -1.52
COPB1P53618 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COPB1P53618 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COPB1P53618 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COPB1P53618 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COPB1P53618 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
COPB1P53618 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.57□□□□□ -1.52
COPB1P53618 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
COPB1P53618 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.57□□□□□ -1.52
COPB1P53618 MIR1178-201ENST00000408396 91 ntBASIC5.57□□□□□ -1.52
COPB1P53618 SNORA79B-201ENST00000410557 148 ntBASIC5.57□□□□□ -1.52
COPB1P53618 OR51B3P-201ENST00000412287 913 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AP000534.2-201ENST00000412729 568 ntBASIC5.57□□□□□ -1.52
COPB1P53618 MTATP6P20-201ENST00000414147 562 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AL445183.3-201ENST00000414168 502 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.57□□□□□ -1.52
COPB1P53618 BX510359.3-201ENST00000422168 306 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AL355433.1-201ENST00000422804 300 ntBASIC5.57□□□□□ -1.52
COPB1P53618 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COPB1P53618 MTCO1P53-201ENST00000441633 699 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC004980.3-201ENST00000447046 365 ntBASIC5.57□□□□□ -1.52
COPB1P53618 Z92846.1-201ENST00000456203 268 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.57□□□□□ -1.52
COPB1P53618 RN7SL610P-201ENST00000463845 291 ntBASIC5.57□□□□□ -1.52
COPB1P53618 RPS26P39-201ENST00000469206 341 ntBASIC5.57□□□□□ -1.52
COPB1P53618 RPL21P47-201ENST00000483696 477 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.57□□□□□ -1.52
COPB1P53618 HMGB3P16-201ENST00000508037 287 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.57□□□□□ -1.52
COPB1P53618 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.57□□□□□ -1.52
COPB1P53618 AC133963.2-201ENST00000513686 578 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.57□□□□□ -1.52
COPB1P53618 RNU6-276P-201ENST00000516114 96 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC091163.3-201ENST00000518269 1144 ntBASIC5.57□□□□□ -1.52
COPB1P53618 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.57□□□□□ -1.52
COPB1P53618 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.57□□□□□ -1.52
COPB1P53618 HAUS1P3-201ENST00000523909 662 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC027026.1-201ENST00000532323 742 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.57□□□□□ -1.52
COPB1P53618 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.57□□□□□ -1.52
COPB1P53618 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COPB1P53618 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COPB1P53618 AL121839.1-201ENST00000556233 1185 ntBASIC5.57□□□□□ -1.52
COPB1P53618 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.57□□□□□ -1.52
COPB1P53618 AC116553.2-201ENST00000564203 463 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC005412.1-201ENST00000580812 1049 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.57□□□□□ -1.52
COPB1P53618 CBX3P2-202ENST00000583365 535 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.57□□□□□ -1.52
COPB1P53618 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.57□□□□□ -1.52
COPB1P53618 VN1R87P-201ENST00000596706 487 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.57□□□□□ -1.52
COPB1P53618 AC022022.2-201ENST00000602989 360 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC084373.1-201ENST00000603311 235 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC099785.1-201ENST00000605697 437 ntBASIC5.57□□□□□ -1.52
COPB1P53618 RNU4-5P-201ENST00000607255 135 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC079395.2-201ENST00000610982 737 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.57□□□□□ -1.52
COPB1P53618 AC005840.5-201ENST00000619166 599 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC015722.2-201ENST00000622210 551 ntBASIC5.57□□□□□ -1.52
COPB1P53618 MIR6730-201ENST00000622213 67 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.57□□□□□ -1.52
COPB1P53618 SAMMSON-209ENST00000641222 1100 ntBASIC5.57□□□□□ -1.52
COPB1P53618 AC093591.2-201ENST00000565254 3843 ntBASIC5.57□□□□□ -1.52
COPB1P53618 STX3-208ENST00000641815 3236 ntBASIC5.57□□□□□ -1.52
COPB1P53618 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.57□□□□□ -1.52
COPB1P53618 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.57□□□□□ -1.52
COPB1P53618 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
COPB1P53618 AC132825.1-201ENST00000463573 2247 ntBASIC5.56□□□□□ -1.52
COPB1P53618 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
COPB1P53618 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.56□□□□□ -1.52
COPB1P53618 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
COPB1P53618 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COPB1P53618 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COPB1P53618 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.56□□□□□ -1.52
COPB1P53618 GNG5P5-201ENST00000420444 220 ntBASIC5.56□□□□□ -1.52
COPB1P53618 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.56□□□□□ -1.52
COPB1P53618 NANOGP5-201ENST00000424456 877 ntBASIC5.56□□□□□ -1.52
COPB1P53618 AC093655.2-201ENST00000425735 631 ntBASIC5.56□□□□□ -1.52
COPB1P53618 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.56□□□□□ -1.52
COPB1P53618 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.56□□□□□ -1.52
COPB1P53618 MTCO1P43-201ENST00000431831 488 ntBASIC5.56□□□□□ -1.52
COPB1P53618 BX323845.1-201ENST00000432417 179 ntBASIC5.56□□□□□ -1.52
COPB1P53618 AC245047.2-201ENST00000441060 530 ntBASIC5.56□□□□□ -1.52
COPB1P53618 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.56□□□□□ -1.52
COPB1P53618 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COPB1P53618 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COPB1P53618 RN7SL443P-201ENST00000464331 290 ntBASIC5.56□□□□□ -1.52
COPB1P53618 SUMO2P4-201ENST00000504193 276 ntBASIC5.56□□□□□ -1.52
COPB1P53618 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COPB1P53618 GTF2F2P1-201ENST00000511083 675 ntBASIC5.56□□□□□ -1.52
COPB1P53618 AC005351.1-201ENST00000511152 786 ntBASIC5.56□□□□□ -1.52
COPB1P53618 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.56□□□□□ -1.52
COPB1P53618 RNA5SP303-201ENST00000516192 130 ntBASIC5.56□□□□□ -1.52
COPB1P53618 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.56□□□□□ -1.52
COPB1P53618 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.56□□□□□ -1.52
COPB1P53618 BUD31P1-201ENST00000521828 359 ntBASIC5.56□□□□□ -1.52
COPB1P53618 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.56□□□□□ -1.52
COPB1P53618 OR8A2P-201ENST00000528631 952 ntBASIC5.56□□□□□ -1.52
COPB1P53618 AC005868.1-201ENST00000536421 331 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms