Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RNA5SP315-201ENST00000516340 116 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 RNA5SP312-201ENST00000517068 116 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 MTCO1P49-201ENST00000523429 802 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.61□□□□□ -1.67
CXCL12P48061 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.61□□□□□ -1.67
CXCL12P48061 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.61□□□□□ -1.67
CXCL12P48061 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.61□□□□□ -1.67
CXCL12P48061 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.61□□□□□ -1.67
CXCL12P48061 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.61□□□□□ -1.67
CXCL12P48061 AC105036.1-201ENST00000566222 271 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 PRPF19P1-201ENST00000584766 898 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.61□□□□□ -1.67
CXCL12P48061 AL591034.3-201ENST00000605511 685 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 MIR492-201ENST00000638676 116 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 AC073869.7-201ENST00000640874 297 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.61□□□□□ -1.67
CXCL12P48061 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CXCL12P48061 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CXCL12P48061 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CXCL12P48061 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CXCL12P48061 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CXCL12P48061 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CXCL12P48061 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.6□□□□□ -1.67
CXCL12P48061 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL12P48061 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CXCL12P48061 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL12P48061 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CXCL12P48061 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL12P48061 RNU1-13P-201ENST00000384499 162 ntBASIC4.6□□□□□ -1.67
CXCL12P48061 CASKP1-201ENST00000412870 582 ntBASIC4.6□□□□□ -1.67
CXCL12P48061 OR13Z1P-201ENST00000416141 834 ntBASIC4.6□□□□□ -1.67
CXCL12P48061 RCC2P2-201ENST00000422174 918 ntBASIC4.6□□□□□ -1.67
CXCL12P48061 RPL23AP38-201ENST00000423801 469 ntBASIC4.6□□□□□ -1.67
CXCL12P48061 AL451062.2-201ENST00000427515 271 ntBASIC4.6□□□□□ -1.67
CXCL12P48061 AP001324.1-201ENST00000428553 399 ntBASIC4.6□□□□□ -1.67
CXCL12P48061 BX276092.6-201ENST00000430476 250 ntBASIC4.6□□□□□ -1.67
CXCL12P48061 FTLP19-201ENST00000433300 394 ntBASIC4.6□□□□□ -1.67
CXCL12P48061 MTND2P40-201ENST00000436718 841 ntBASIC4.6□□□□□ -1.67
CXCL12P48061 TDGF1P1-201ENST00000445734 527 ntBASIC4.6□□□□□ -1.67
CXCL12P48061 OR52E3P-201ENST00000452083 936 ntBASIC4.6□□□□□ -1.67
CXCL12P48061 BX276092.8-201ENST00000455722 250 ntBASIC4.6□□□□□ -1.67
CXCL12P48061 AC073073.1-201ENST00000493920 463 ntBASIC4.6□□□□□ -1.67
CXCL12P48061 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.6□□□□□ -1.67
CXCL12P48061 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.6□□□□□ -1.67
CXCL12P48061 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.6□□□□□ -1.67
CXCL12P48061 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.6□□□□□ -1.67
CXCL12P48061 AGGF1P9-201ENST00000561884 913 ntBASIC4.6□□□□□ -1.67
CXCL12P48061 AC006130.2-201ENST00000586202 326 ntBASIC4.6□□□□□ -1.67
CXCL12P48061 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.6□□□□□ -1.67
CXCL12P48061 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.6□□□□□ -1.67
CXCL12P48061 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.6□□□□□ -1.67
CXCL12P48061 TMEM30CP-203ENST00000637814 1035 ntBASIC4.6□□□□□ -1.67
CXCL12P48061 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
CXCL12P48061 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL12P48061 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CXCL12P48061 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.6□□□□□ -1.67
CXCL12P48061 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CXCL12P48061 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL12P48061 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL12P48061 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CXCL12P48061 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CXCL12P48061 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CXCL12P48061 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CXCL12P48061 SPRR2C-201ENST00000290702 219 ntBASIC4.59□□□□□ -1.67
CXCL12P48061 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CXCL12P48061 GNG5P5-201ENST00000420444 220 ntBASIC4.59□□□□□ -1.67
CXCL12P48061 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.59□□□□□ -1.67
CXCL12P48061 RPL5P2-201ENST00000429598 854 ntBASIC4.59□□□□□ -1.67
CXCL12P48061 AL132765.1-201ENST00000434165 553 ntBASIC4.59□□□□□ -1.67
CXCL12P48061 RPSAP41-201ENST00000439695 860 ntBASIC4.59□□□□□ -1.67
CXCL12P48061 RPL7P33-201ENST00000444159 742 ntBASIC4.59□□□□□ -1.67
CXCL12P48061 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.59□□□□□ -1.67
CXCL12P48061 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CXCL12P48061 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.59□□□□□ -1.67
CXCL12P48061 AP002812.1-201ENST00000495378 474 ntBASIC4.59□□□□□ -1.67
CXCL12P48061 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.59□□□□□ -1.67
CXCL12P48061 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.59□□□□□ -1.67
CXCL12P48061 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.59□□□□□ -1.67
CXCL12P48061 FKBP1BP1-201ENST00000553366 325 ntBASIC4.59□□□□□ -1.67
CXCL12P48061 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.59□□□□□ -1.67
CXCL12P48061 AGGF1P6-201ENST00000569213 976 ntBASIC4.59□□□□□ -1.67
CXCL12P48061 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.59□□□□□ -1.67
CXCL12P48061 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.59□□□□□ -1.67
CXCL12P48061 AC022916.3-201ENST00000592961 742 ntBASIC4.59□□□□□ -1.67
CXCL12P48061 AP001160.4-201ENST00000596971 382 ntBASIC4.59□□□□□ -1.67
CXCL12P48061 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.59□□□□□ -1.67
CXCL12P48061 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.59□□□□□ -1.67
CXCL12P48061 AL121950.1-201ENST00000624993 2077 ntBASIC4.59□□□□□ -1.67
CXCL12P48061 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.59□□□□□ -1.67
CXCL12P48061 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.59□□□□□ -1.68
CXCL12P48061 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
CXCL12P48061 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
CXCL12P48061 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CXCL12P48061 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
CXCL12P48061 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL12P48061 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CXCL12P48061 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CXCL12P48061 ICE2P1-201ENST00000512800 1849 ntBASIC4.58□□□□□ -1.68
CXCL12P48061 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms