Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
CLIP1P30622 AC097461.1-201ENST00000568928 2821 ntBASIC7.07□□□□□ -1.28
CLIP1P30622 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CLIP1P30622 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CLIP1P30622 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC7.07□□□□□ -1.28
CLIP1P30622 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
CLIP1P30622 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC7.06□□□□□ -1.28
CLIP1P30622 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
CLIP1P30622 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CLIP1P30622 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CLIP1P30622 MIR331-201ENST00000362302 94 ntBASIC7.06□□□□□ -1.28
CLIP1P30622 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CLIP1P30622 RPS26P8-201ENST00000393490 348 ntBASIC7.06□□□□□ -1.28
CLIP1P30622 RPL23AP26-201ENST00000412728 464 ntBASIC7.06□□□□□ -1.28
CLIP1P30622 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CLIP1P30622 UBE2V1P3-201ENST00000439651 417 ntBASIC7.06□□□□□ -1.28
CLIP1P30622 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC7.06□□□□□ -1.28
CLIP1P30622 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC7.06□□□□□ -1.28
CLIP1P30622 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CLIP1P30622 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC7.06□□□□□ -1.28
CLIP1P30622 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.06□□□□□ -1.28
CLIP1P30622 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
CLIP1P30622 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CLIP1P30622 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP1P30622 AL133268.1-201ENST00000405676 1401 ntBASIC7.05□□□□□ -1.28
CLIP1P30622 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP1P30622 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC7.05□□□□□ -1.28
CLIP1P30622 RNA5SP366-201ENST00000365454 123 ntBASIC7.05□□□□□ -1.28
CLIP1P30622 ATP5F1P2-201ENST00000398143 760 ntBASIC7.05□□□□□ -1.28
CLIP1P30622 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC7.05□□□□□ -1.28
CLIP1P30622 AC122718.1-201ENST00000439448 744 ntBASIC7.05□□□□□ -1.28
CLIP1P30622 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC7.05□□□□□ -1.28
CLIP1P30622 FAM133DP-201ENST00000464802 691 ntBASIC7.05□□□□□ -1.28
CLIP1P30622 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC7.05□□□□□ -1.28
CLIP1P30622 MIR2116-201ENST00000517221 80 ntBASIC7.05□□□□□ -1.28
CLIP1P30622 CYCSP29-201ENST00000533731 318 ntBASIC7.05□□□□□ -1.28
CLIP1P30622 PSMB7P1-201ENST00000556349 514 ntBASIC7.05□□□□□ -1.28
CLIP1P30622 AC090515.3-201ENST00000560431 315 ntBASIC7.05□□□□□ -1.28
CLIP1P30622 AL354984.3-201ENST00000604803 325 ntBASIC7.05□□□□□ -1.28
CLIP1P30622 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC7.05□□□□□ -1.28
CLIP1P30622 AC015871.5-202ENST00000623252 701 ntBASIC7.05□□□□□ -1.28
CLIP1P30622 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC7.05□□□□□ -1.28
CLIP1P30622 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP1P30622 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLIP1P30622 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CLIP1P30622 NXPH1-205ENST00000602349 1953 ntBASIC7.05□□□□□ -1.28
CLIP1P30622 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CLIP1P30622 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
CLIP1P30622 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP1P30622 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CLIP1P30622 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP1P30622 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP1P30622 MIR3065-201ENST00000390137 79 ntBASIC7.04□□□□□ -1.28
CLIP1P30622 AC097374.1-203ENST00000400783 485 ntBASIC7.04□□□□□ -1.28
CLIP1P30622 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC7.04□□□□□ -1.28
CLIP1P30622 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC7.04□□□□□ -1.28
CLIP1P30622 NUTF2P3-201ENST00000448540 384 ntBASIC7.04□□□□□ -1.28
CLIP1P30622 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP1P30622 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC7.04□□□□□ -1.28
CLIP1P30622 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC7.04□□□□□ -1.28
CLIP1P30622 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC7.04□□□□□ -1.28
CLIP1P30622 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP1P30622 ARL6IP1P1-201ENST00000545836 610 ntBASIC7.04□□□□□ -1.28
CLIP1P30622 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC7.04□□□□□ -1.28
CLIP1P30622 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7.04□□□□□ -1.28
CLIP1P30622 AC093227.2-201ENST00000589357 285 ntBASIC7.04□□□□□ -1.28
CLIP1P30622 IPO5P1-202ENST00000600039 287 ntBASIC7.04□□□□□ -1.28
CLIP1P30622 RPL7P50-201ENST00000600588 727 ntBASIC7.04□□□□□ -1.28
CLIP1P30622 AC002069.2-201ENST00000603580 883 ntBASIC7.04□□□□□ -1.28
CLIP1P30622 AL591034.3-201ENST00000605511 685 ntBASIC7.04□□□□□ -1.28
CLIP1P30622 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC7.04□□□□□ -1.28
CLIP1P30622 uc_338.13-201ENST00000618243 179 ntBASIC7.04□□□□□ -1.28
CLIP1P30622 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP1P30622 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.04□□□□□ -1.28
CLIP1P30622 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC7.04□□□□□ -1.28
CLIP1P30622 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLIP1P30622 AC105074.1-201ENST00000623380 3095 ntBASIC7.04□□□□□ -1.28
CLIP1P30622 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
CLIP1P30622 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CLIP1P30622 LYST-202ENST00000389794 12985 ntTSL 5 BASIC7.03□□□□□ -1.28
CLIP1P30622 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC7.03□□□□□ -1.28
CLIP1P30622 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CLIP1P30622 RPL7P33-201ENST00000444159 742 ntBASIC7.03□□□□□ -1.28
CLIP1P30622 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC7.03□□□□□ -1.28
CLIP1P30622 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC7.03□□□□□ -1.28
CLIP1P30622 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7.03□□□□□ -1.28
CLIP1P30622 AL392048.1-201ENST00000613946 534 ntBASIC7.03□□□□□ -1.28
CLIP1P30622 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC7.03□□□□□ -1.28
CLIP1P30622 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
CLIP1P30622 AP000641.1-201ENST00000531988 1639 ntBASIC7.03□□□□□ -1.28
CLIP1P30622 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
CLIP1P30622 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC7.03□□□□□ -1.28
CLIP1P30622 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
CLIP1P30622 AL022722.2-201ENST00000402519 180 ntBASIC7.02□□□□□ -1.29
CLIP1P30622 RNA5SP317-201ENST00000410176 116 ntBASIC7.02□□□□□ -1.29
CLIP1P30622 RNA5SP311-201ENST00000411290 116 ntBASIC7.02□□□□□ -1.29
CLIP1P30622 AC062016.2-201ENST00000420950 676 ntBASIC7.02□□□□□ -1.29
CLIP1P30622 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.02□□□□□ -1.29
CLIP1P30622 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CLIP1P30622 AL031584.1-201ENST00000447169 754 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms