Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5□□□□□ -1.61
ABCD3P28288 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5□□□□□ -1.61
ABCD3P28288 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5□□□□□ -1.61
ABCD3P28288 AC073387.2-201ENST00000604797 784 ntBASIC5□□□□□ -1.61
ABCD3P28288 AC090912.3-201ENST00000609775 533 ntBASIC5□□□□□ -1.61
ABCD3P28288 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
ABCD3P28288 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5□□□□□ -1.61
ABCD3P28288 AP003485.1-201ENST00000625093 753 ntBASIC5□□□□□ -1.61
ABCD3P28288 AL121594.5-201ENST00000631724 573 ntBASIC5□□□□□ -1.61
ABCD3P28288 OR4G3P-201ENST00000633500 913 ntBASIC5□□□□□ -1.61
ABCD3P28288 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5□□□□□ -1.61
ABCD3P28288 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5□□□□□ -1.61
ABCD3P28288 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5□□□□□ -1.61
ABCD3P28288 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5□□□□□ -1.61
ABCD3P28288 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5□□□□□ -1.61
ABCD3P28288 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5□□□□□ -1.61
ABCD3P28288 MTCO1P11-201ENST00000429111 1528 ntBASIC5□□□□□ -1.61
ABCD3P28288 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
ABCD3P28288 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
ABCD3P28288 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5□□□□□ -1.61
ABCD3P28288 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
ABCD3P28288 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5□□□□□ -1.61
ABCD3P28288 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ABCD3P28288 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5□□□□□ -1.61
ABCD3P28288 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5□□□□□ -1.61
ABCD3P28288 CASC19-204ENST00000641001 2055 ntBASIC5□□□□□ -1.61
ABCD3P28288 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
ABCD3P28288 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.99□□□□□ -1.61
ABCD3P28288 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 SNORA51.1-201ENST00000363243 140 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 RN7SKP145-201ENST00000363291 303 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 RN7SKP162-201ENST00000363605 345 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.99□□□□□ -1.61
ABCD3P28288 RNU6-146P-201ENST00000384602 108 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ABCD3P28288 SNORA68.2-201ENST00000391263 128 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 PPIAP9-201ENST00000403866 498 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 AL391361.1-201ENST00000405580 489 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 AL133482.1-201ENST00000415988 498 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 TAF13P2-201ENST00000416876 286 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 AC106883.1-201ENST00000418805 562 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 AL133325.1-201ENST00000421090 382 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.99□□□□□ -1.61
ABCD3P28288 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.99□□□□□ -1.61
ABCD3P28288 RPL7P4-203ENST00000430239 730 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 RPL21P110-201ENST00000433345 446 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 CYCSP6-201ENST00000434498 302 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 AL359265.1-201ENST00000440296 795 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 EEF1A1P1-201ENST00000447052 739 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.99□□□□□ -1.61
ABCD3P28288 RPS26P41-201ENST00000450370 284 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
ABCD3P28288 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.99□□□□□ -1.61
ABCD3P28288 OR2AF1P-201ENST00000454899 889 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 RNU7-140P-201ENST00000459546 60 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 RPL6P9-201ENST00000466502 859 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 AC092754.1-201ENST00000472975 479 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 AC073522.1-201ENST00000483312 377 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 AC008837.1-201ENST00000511513 412 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
ABCD3P28288 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 RNU6-941P-201ENST00000516346 108 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.99□□□□□ -1.61
ABCD3P28288 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.99□□□□□ -1.61
ABCD3P28288 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.99□□□□□ -1.61
ABCD3P28288 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.99□□□□□ -1.61
ABCD3P28288 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.99□□□□□ -1.61
ABCD3P28288 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.99□□□□□ -1.61
ABCD3P28288 AC005341.1-201ENST00000571086 708 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 RBM22P1-201ENST00000578589 1214 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 MIR3176-201ENST00000582210 90 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.99□□□□□ -1.61
ABCD3P28288 AC110743.1-201ENST00000584870 478 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 AC022467.1-201ENST00000614738 749 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 MIR6886-201ENST00000619864 61 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.99□□□□□ -1.61
ABCD3P28288 AC135068.5-201ENST00000624197 983 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.99□□□□□ -1.61
ABCD3P28288 BX649567.1-201ENST00000642071 1134 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ABCD3P28288 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.99□□□□□ -1.61
ABCD3P28288 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.99□□□□□ -1.61
ABCD3P28288 AC090971.4-201ENST00000560291 1800 ntBASIC4.99□□□□□ -1.61
ABCD3P28288 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms