Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.03□□□□□ -1.6
COL11A1P12107 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL11A1P12107 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.03□□□□□ -1.6
COL11A1P12107 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.03□□□□□ -1.6
COL11A1P12107 AC083837.1-201ENST00000565297 2994 ntBASIC5.03□□□□□ -1.6
COL11A1P12107 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL11A1P12107 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
COL11A1P12107 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL11A1P12107 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
COL11A1P12107 SPRR2C-201ENST00000290702 219 ntBASIC5.03□□□□□ -1.6
COL11A1P12107 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
COL11A1P12107 CYCSP19-201ENST00000411715 316 ntBASIC5.03□□□□□ -1.6
COL11A1P12107 MFSD13B-201ENST00000420133 1290 ntBASIC5.03□□□□□ -1.6
COL11A1P12107 AC062016.2-201ENST00000420950 676 ntBASIC5.03□□□□□ -1.6
COL11A1P12107 HSFY6P-201ENST00000445573 403 ntBASIC5.03□□□□□ -1.6
COL11A1P12107 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.03□□□□□ -1.6
COL11A1P12107 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.03□□□□□ -1.6
COL11A1P12107 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.03□□□□□ -1.6
COL11A1P12107 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.03□□□□□ -1.6
COL11A1P12107 MIR4472-2-201ENST00000582069 67 ntBASIC5.03□□□□□ -1.6
COL11A1P12107 AC010201.1-201ENST00000605051 540 ntBASIC5.03□□□□□ -1.6
COL11A1P12107 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL11A1P12107 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL11A1P12107 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.03□□□□□ -1.6
COL11A1P12107 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.03□□□□□ -1.6
COL11A1P12107 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL11A1P12107 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL11A1P12107 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.03□□□□□ -1.6
COL11A1P12107 TET1P1-201ENST00000426627 2301 ntBASIC5.03□□□□□ -1.6
COL11A1P12107 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL11A1P12107 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.03□□□□□ -1.6
COL11A1P12107 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL11A1P12107 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.02□□□□□ -1.61
COL11A1P12107 AC099654.3-201ENST00000447087 1546 ntBASIC5.02□□□□□ -1.61
COL11A1P12107 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
COL11A1P12107 SNORA37-201ENST00000384504 129 ntBASIC5.02□□□□□ -1.61
COL11A1P12107 ATP5F1P2-201ENST00000398143 760 ntBASIC5.02□□□□□ -1.61
COL11A1P12107 SNORA74C-2-201ENST00000411179 201 ntBASIC5.02□□□□□ -1.61
COL11A1P12107 CTSL3P-202ENST00000412179 788 ntBASIC5.02□□□□□ -1.61
COL11A1P12107 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.02□□□□□ -1.61
COL11A1P12107 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.02□□□□□ -1.61
COL11A1P12107 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.02□□□□□ -1.61
COL11A1P12107 DDX39BP2-208ENST00000453923 258 ntBASIC5.02□□□□□ -1.61
COL11A1P12107 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL11A1P12107 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.02□□□□□ -1.61
COL11A1P12107 AL132838.2-201ENST00000492041 314 ntBASIC5.02□□□□□ -1.61
COL11A1P12107 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.02□□□□□ -1.61
COL11A1P12107 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.02□□□□□ -1.61
COL11A1P12107 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.02□□□□□ -1.61
COL11A1P12107 AP002360.3-201ENST00000607673 710 ntBASIC5.02□□□□□ -1.61
COL11A1P12107 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
COL11A1P12107 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL11A1P12107 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL11A1P12107 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
COL11A1P12107 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL11A1P12107 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL11A1P12107 AC139769.1-204ENST00000472297 1931 ntBASIC5.02□□□□□ -1.61
COL11A1P12107 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL11A1P12107 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
COL11A1P12107 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.02□□□□□ -1.61
COL11A1P12107 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.02□□□□□ -1.61
COL11A1P12107 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.02□□□□□ -1.61
COL11A1P12107 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.02□□□□□ -1.61
COL11A1P12107 AL358178.1-201ENST00000407698 397 ntBASIC5.02□□□□□ -1.61
COL11A1P12107 RNA5SP36-201ENST00000410197 133 ntBASIC5.02□□□□□ -1.61
COL11A1P12107 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL11A1P12107 RPL23AP38-201ENST00000423801 469 ntBASIC5.02□□□□□ -1.61
COL11A1P12107 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.02□□□□□ -1.61
COL11A1P12107 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.02□□□□□ -1.61
COL11A1P12107 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.02□□□□□ -1.61
COL11A1P12107 NPM1P41-201ENST00000512920 831 ntBASIC5.02□□□□□ -1.61
COL11A1P12107 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.02□□□□□ -1.61
COL11A1P12107 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
COL11A1P12107 AC091178.1-203ENST00000584586 279 ntBASIC5.02□□□□□ -1.61
COL11A1P12107 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.02□□□□□ -1.61
COL11A1P12107 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL11A1P12107 AC105074.1-201ENST00000623380 3095 ntBASIC5.01□□□□□ -1.61
COL11A1P12107 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
COL11A1P12107 CASC19-255ENST00000641733 1385 ntBASIC5.01□□□□□ -1.61
COL11A1P12107 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL11A1P12107 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL11A1P12107 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.01□□□□□ -1.61
COL11A1P12107 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.01□□□□□ -1.61
COL11A1P12107 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL11A1P12107 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
COL11A1P12107 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL11A1P12107 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.01□□□□□ -1.61
COL11A1P12107 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL11A1P12107 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL11A1P12107 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
COL11A1P12107 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
COL11A1P12107 RNA5SP283-201ENST00000365604 119 ntBASIC5.01□□□□□ -1.61
COL11A1P12107 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.01□□□□□ -1.61
COL11A1P12107 RPL6P29-201ENST00000414863 865 ntBASIC5.01□□□□□ -1.61
COL11A1P12107 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.01□□□□□ -1.61
COL11A1P12107 Z95327.1-201ENST00000446082 482 ntBASIC5.01□□□□□ -1.61
COL11A1P12107 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.01□□□□□ -1.61
COL11A1P12107 RNA5SP49-201ENST00000516450 115 ntBASIC5.01□□□□□ -1.61
COL11A1P12107 RNU1-45P-201ENST00000517191 141 ntBASIC5.01□□□□□ -1.61
COL11A1P12107 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms