Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 NDUFB5P1-201ENST00000508134 564 ntBASIC4.14□□□□□ -1.75
HLA-DPB1P04440 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 AC069240.1-201ENST00000548774 375 ntBASIC4.14□□□□□ -1.75
HLA-DPB1P04440 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 OR1F2P-201ENST00000570470 933 ntBASIC4.14□□□□□ -1.75
HLA-DPB1P04440 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 AC015813.4-201ENST00000610469 179 ntBASIC4.14□□□□□ -1.75
HLA-DPB1P04440 CR381572.2-201ENST00000624852 397 ntBASIC4.14□□□□□ -1.75
HLA-DPB1P04440 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.14□□□□□ -1.75
HLA-DPB1P04440 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 CDC27P2-201ENST00000425026 1922 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AL672167.2-201ENST00000377164 879 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AL109941.1-201ENST00000401925 229 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 COX6B1P1-201ENST00000415962 213 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 MTCO1P51-201ENST00000427672 1060 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 RPL12P3-201ENST00000440080 396 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 RPS27AP15-201ENST00000447672 466 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 SLC25A18P1-201ENST00000449385 454 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 OR52J1P-201ENST00000450596 932 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 OR6C72P-201ENST00000451403 892 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AL645937.3-201ENST00000453647 936 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AC010469.1-201ENST00000463864 576 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AC090013.1-201ENST00000485147 480 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AC025445.1-201ENST00000502728 300 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AC015795.1-201ENST00000513669 327 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 RNA5SP154-201ENST00000516193 111 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 RNA5SP360-201ENST00000516555 118 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AP001542.1-201ENST00000591314 200 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AC011453.2-201ENST00000603737 729 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 QTRT1P1-201ENST00000604344 1078 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AC007497.1-201ENST00000610421 561 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AC087385.3-201ENST00000620477 187 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 CASC19-222ENST00000641321 1173 ntBASIC4.13□□□□□ -1.75
HLA-DPB1P04440 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPB1P04440 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 RNA5SP191-201ENST00000362585 102 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 RPS24P12-201ENST00000402084 394 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 GLUD1P9-201ENST00000420997 1173 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 AC007394.1-201ENST00000421941 531 ntBASIC4.12□□□□□ -1.75
HLA-DPB1P04440 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DPB1P04440 OR2B7P-201ENST00000429302 934 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms