Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.52□□□□□ -1.37
PDGFAP04085 MIR378C-201ENST00000578683 81 ntBASIC6.52□□□□□ -1.37
PDGFAP04085 H3F3BP2-201ENST00000583907 357 ntBASIC6.52□□□□□ -1.37
PDGFAP04085 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC6.52□□□□□ -1.37
PDGFAP04085 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFAP04085 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.52□□□□□ -1.37
PDGFAP04085 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFAP04085 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.52□□□□□ -1.37
PDGFAP04085 AL162413.1-201ENST00000603198 110 ntBASIC6.52□□□□□ -1.37
PDGFAP04085 AL161734.1-201ENST00000609720 557 ntBASIC6.52□□□□□ -1.37
PDGFAP04085 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.52□□□□□ -1.37
PDGFAP04085 AC015712.7-201ENST00000615211 635 ntBASIC6.52□□□□□ -1.37
PDGFAP04085 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC6.52□□□□□ -1.37
PDGFAP04085 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.52□□□□□ -1.37
PDGFAP04085 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
PDGFAP04085 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFAP04085 AC006026.1-201ENST00000444025 1803 ntBASIC6.52□□□□□ -1.37
PDGFAP04085 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.52□□□□□ -1.37
PDGFAP04085 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFAP04085 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.52□□□□□ -1.37
PDGFAP04085 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
PDGFAP04085 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFAP04085 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFAP04085 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC6.52□□□□□ -1.37
PDGFAP04085 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFAP04085 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.52□□□□□ -1.37
PDGFAP04085 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.52□□□□□ -1.37
PDGFAP04085 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFAP04085 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFAP04085 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFAP04085 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFAP04085 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFAP04085 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFAP04085 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFAP04085 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFAP04085 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.51□□□□□ -1.37
PDGFAP04085 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
PDGFAP04085 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFAP04085 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFAP04085 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFAP04085 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.51□□□□□ -1.37
PDGFAP04085 RNA5SP382-201ENST00000363355 112 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 RNU6-444P-201ENST00000383988 108 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 RNU2-8P-201ENST00000410727 190 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 AP000534.2-201ENST00000412729 568 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 JKAMPP1-201ENST00000413804 919 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.51□□□□□ -1.37
PDGFAP04085 RAC1P4-201ENST00000419413 579 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 THEM7P-201ENST00000419556 672 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.51□□□□□ -1.37
PDGFAP04085 AC008850.1-201ENST00000427546 362 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 RPL31P35-201ENST00000431058 377 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 RPEP2-201ENST00000432149 701 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 AC010881.1-201ENST00000433830 235 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC6.51□□□□□ -1.37
PDGFAP04085 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC6.51□□□□□ -1.37
PDGFAP04085 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC6.51□□□□□ -1.37
PDGFAP04085 RPS10P18-201ENST00000442662 495 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.51□□□□□ -1.37
PDGFAP04085 RPS18P1-201ENST00000447840 458 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 AC132479.1-201ENST00000449160 144 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.51□□□□□ -1.37
PDGFAP04085 RPL23AP15-201ENST00000450202 459 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 AL445991.1-201ENST00000450381 475 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC6.51□□□□□ -1.37
PDGFAP04085 HMGB1P7-201ENST00000450921 612 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 MTND1P12-201ENST00000455231 147 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 AC022364.2-201ENST00000457963 554 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 RN7SL492P-201ENST00000460700 295 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 RPS15AP17-201ENST00000470598 390 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 AC010301.1-201ENST00000473936 355 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 RPL23AP8-201ENST00000479812 475 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 RN7SL568P-201ENST00000493069 298 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.51□□□□□ -1.37
PDGFAP04085 AC008967.1-201ENST00000504843 163 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.51□□□□□ -1.37
PDGFAP04085 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC6.51□□□□□ -1.37
PDGFAP04085 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.51□□□□□ -1.37
PDGFAP04085 Y_RNA.675-201ENST00000516389 149 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFAP04085 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.51□□□□□ -1.37
PDGFAP04085 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC6.51□□□□□ -1.37
PDGFAP04085 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.51□□□□□ -1.37
PDGFAP04085 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.51□□□□□ -1.37
PDGFAP04085 AC090424.1-201ENST00000535243 736 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.51□□□□□ -1.37
PDGFAP04085 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFAP04085 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC6.51□□□□□ -1.37
PDGFAP04085 AC125611.2-201ENST00000551907 647 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.51□□□□□ -1.37
PDGFAP04085 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
PDGFAP04085 AC011447.2-201ENST00000592921 283 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 AL391646.1-201ENST00000603860 190 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 AC090948.2-201ENST00000607363 564 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 AC009233.1-201ENST00000616477 371 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 MRPL57P3-201ENST00000619218 176 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 MIR6503-201ENST00000622884 86 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 FRG1KP-201ENST00000623592 341 ntBASIC6.51□□□□□ -1.37
PDGFAP04085 AC005858.3-201ENST00000624756 589 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms