Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 NMNAT1P2-201ENST00000435192 860 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.09□□□□□ -1.43
COL3A1P02461 AC004938.1-201ENST00000438468 308 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.09□□□□□ -1.43
COL3A1P02461 EIF2S2P2-201ENST00000447161 982 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 MTND1P31-201ENST00000449206 961 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC6.09□□□□□ -1.43
COL3A1P02461 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.09□□□□□ -1.43
COL3A1P02461 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.09□□□□□ -1.43
COL3A1P02461 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.09□□□□□ -1.43
COL3A1P02461 RNA5SP249-201ENST00000516127 99 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL3A1P02461 AP003049.1-201ENST00000529418 457 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 AC139103.1-201ENST00000534696 1030 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.09□□□□□ -1.43
COL3A1P02461 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.09□□□□□ -1.43
COL3A1P02461 AC012557.2-201ENST00000605919 418 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 AC064807.4-201ENST00000607201 407 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 AC020634.1-201ENST00000608701 549 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 AC006386.1-201ENST00000619436 415 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.09□□□□□ -1.43
COL3A1P02461 AL049536.1-201ENST00000625043 744 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 AC099654.9-201ENST00000637055 678 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.43
COL3A1P02461 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.09□□□□□ -1.43
COL3A1P02461 CCT8P1-201ENST00000413611 1657 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL3A1P02461 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.09□□□□□ -1.43
COL3A1P02461 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
COL3A1P02461 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC6.09□□□□□ -1.43
COL3A1P02461 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
COL3A1P02461 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.09□□□□□ -1.43
COL3A1P02461 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL3A1P02461 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL3A1P02461 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC6.09□□□□□ -1.43
COL3A1P02461 AC139713.2-214ENST00000642059 1811 ntBASIC6.09□□□□□ -1.43
COL3A1P02461 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
COL3A1P02461 AL359922.3-201ENST00000624779 1670 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL3A1P02461 U3.22-201ENST00000391120 215 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.09□□□□□ -1.44
COL3A1P02461 VPS26BP1-201ENST00000417155 755 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 RAD23BP1-201ENST00000421404 1227 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 RPL12P34-201ENST00000424532 479 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.09□□□□□ -1.44
COL3A1P02461 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC6.09□□□□□ -1.44
COL3A1P02461 AC099063.2-201ENST00000446360 662 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.09□□□□□ -1.44
COL3A1P02461 AL122001.1-201ENST00000457027 370 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 TRAV31-201ENST00000502780 342 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 AC021146.5-201ENST00000503544 545 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 AC098799.3-201ENST00000506095 438 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.09□□□□□ -1.44
COL3A1P02461 AC034244.2-201ENST00000514668 858 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.09□□□□□ -1.44
COL3A1P02461 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.09□□□□□ -1.44
COL3A1P02461 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.09□□□□□ -1.44
COL3A1P02461 CIR1P1-201ENST00000524055 1133 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 TRAV8-5-201ENST00000537369 341 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.09□□□□□ -1.44
COL3A1P02461 AC084783.1-201ENST00000565846 910 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
COL3A1P02461 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC6.09□□□□□ -1.44
COL3A1P02461 AP001160.4-201ENST00000596971 382 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 AC034236.3-201ENST00000605999 461 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 AC013470.4-201ENST00000619978 986 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
COL3A1P02461 AL356863.1-201ENST00000623378 1080 ntBASIC6.09□□□□□ -1.44
COL3A1P02461 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.09□□□□□ -1.44
COL3A1P02461 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
COL3A1P02461 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.08□□□□□ -1.44
COL3A1P02461 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
COL3A1P02461 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL3A1P02461 AC120036.2-201ENST00000509729 1474 ntBASIC6.08□□□□□ -1.44
COL3A1P02461 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL3A1P02461 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
COL3A1P02461 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC6.08□□□□□ -1.44
COL3A1P02461 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL3A1P02461 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL3A1P02461 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
COL3A1P02461 AC008033.1-201ENST00000216407 1162 ntBASIC6.08□□□□□ -1.44
COL3A1P02461 RNA5SP447-201ENST00000363749 119 ntBASIC6.08□□□□□ -1.44
COL3A1P02461 RNU6-167P-201ENST00000384292 106 ntBASIC6.08□□□□□ -1.44
COL3A1P02461 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.08□□□□□ -1.44
COL3A1P02461 CENPIP1-201ENST00000425713 902 ntBASIC6.08□□□□□ -1.44
COL3A1P02461 MTCO3P43-201ENST00000440974 771 ntBASIC6.08□□□□□ -1.44
COL3A1P02461 AC069304.1-201ENST00000491593 704 ntBASIC6.08□□□□□ -1.44
COL3A1P02461 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.08□□□□□ -1.44
COL3A1P02461 RPL5P23-201ENST00000496040 868 ntBASIC6.08□□□□□ -1.44
COL3A1P02461 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL3A1P02461 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.08□□□□□ -1.44
COL3A1P02461 AC119751.5-201ENST00000514077 770 ntBASIC6.08□□□□□ -1.44
COL3A1P02461 RNA5SP446-201ENST00000515955 82 ntBASIC6.08□□□□□ -1.44
COL3A1P02461 RN7SKP92-201ENST00000517266 244 ntBASIC6.08□□□□□ -1.44
COL3A1P02461 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL3A1P02461 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL3A1P02461 BNIP3P7-201ENST00000605641 516 ntBASIC6.08□□□□□ -1.44
COL3A1P02461 MIR6758-201ENST00000620653 63 ntBASIC6.08□□□□□ -1.44
COL3A1P02461 OR2L1P-202ENST00000641567 1023 ntBASIC6.08□□□□□ -1.44
COL3A1P02461 STX3-208ENST00000641815 3236 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms