Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC104997.1-201ENST00000519761 717 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 CYP4A43P-201ENST00000568156 121 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC068790.5-201ENST00000602741 355 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC022387.2-201ENST00000604050 448 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC021106.3-201ENST00000623925 531 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC097504.1-201ENST00000515103 2415 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 DDX18P3-201ENST00000404856 2007 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 AC012020.1-201ENST00000624541 1728 ntBASIC3.56□□□□□ -1.84
HLA-DQA1P01909 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HLA-DQA1P01909 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 RLIMP2-201ENST00000427891 1563 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 BRAFP1-201ENST00000445336 2703 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC067945.1-201ENST00000342609 618 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 RNU4-7P-201ENST00000364758 141 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 MT-TP-201ENST00000387461 68 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC009804.1-201ENST00000400949 179 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 VN1R8P-201ENST00000407739 893 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 MIR1182-201ENST00000408363 97 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 RPL35AP24-201ENST00000413846 330 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 RPS12P5-201ENST00000423449 371 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC073335.1-201ENST00000427776 363 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 BX323845.1-201ENST00000432417 179 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 NDUFA5P1-201ENST00000433858 341 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 RPS27AP15-201ENST00000447672 466 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 BUD31P2-201ENST00000449374 300 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 RPL7P45-201ENST00000455851 743 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 STRADBP1-201ENST00000478954 1281 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 RN7SL184P-201ENST00000488308 297 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 HMGB3P14-201ENST00000494195 599 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC106872.4-201ENST00000510050 523 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 PARP4P3-201ENST00000510265 317 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 IGKV3D-34-201ENST00000522638 302 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 BMPR1APS2-201ENST00000527904 1012 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC092868.3-201ENST00000560515 784 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 RPL10P14-201ENST00000565265 298 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC122134.1-201ENST00000565664 1104 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC020978.7-201ENST00000575953 1187 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AC011445.2-201ENST00000599274 173 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 HMGB1P51-201ENST00000605166 638 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 AL138721.1-201ENST00000616756 179 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 METTL15-211ENST00000634762 718 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 CYP4F35P-202ENST00000636121 390 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 MIR4302-201ENST00000638058 60 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 MAPK10-304ENST00000641341 3984 ntBASIC3.55□□□□□ -1.84
HLA-DQA1P01909 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 A2MP1-204ENST00000566278 4130 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms