Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC092013.1-201ENST00000438795 332 ntBASIC4.8□□□□□ -1.64
TO15178 HMGB3P9-201ENST00000441799 583 ntBASIC4.8□□□□□ -1.64
TO15178 AL163193.1-201ENST00000444895 788 ntBASIC4.8□□□□□ -1.64
TO15178 AC069540.1-201ENST00000446320 988 ntBASIC4.8□□□□□ -1.64
TO15178 HMGN1P5-201ENST00000448591 263 ntBASIC4.8□□□□□ -1.64
TO15178 FAR2P1-206ENST00000449736 709 ntBASIC4.8□□□□□ -1.64
TO15178 RPL7AP52-201ENST00000458096 790 ntBASIC4.8□□□□□ -1.64
TO15178 CYCSP20-201ENST00000473154 315 ntBASIC4.8□□□□□ -1.64
TO15178 NIP7P2-201ENST00000485801 544 ntBASIC4.8□□□□□ -1.64
TO15178 OR5H3P-201ENST00000502817 919 ntBASIC4.8□□□□□ -1.64
TO15178 SNRPCP2-201ENST00000504370 475 ntBASIC4.8□□□□□ -1.64
TO15178 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.8□□□□□ -1.64
TO15178 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.8□□□□□ -1.64
TO15178 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.8□□□□□ -1.64
TO15178 AC108471.1-201ENST00000513977 287 ntBASIC4.8□□□□□ -1.64
TO15178 MTATP6P9-201ENST00000515039 680 ntBASIC4.8□□□□□ -1.64
TO15178 RNU5A-7P-201ENST00000515979 116 ntBASIC4.8□□□□□ -1.64
TO15178 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.8□□□□□ -1.64
TO15178 AP003355.1-201ENST00000518956 587 ntBASIC4.8□□□□□ -1.64
TO15178 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.8□□□□□ -1.64
TO15178 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.8□□□□□ -1.64
TO15178 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TO15178 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.8□□□□□ -1.64
TO15178 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TO15178 EIF1P5-201ENST00000585002 234 ntBASIC4.8□□□□□ -1.64
TO15178 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.8□□□□□ -1.64
TO15178 AP005229.2-201ENST00000609980 697 ntBASIC4.8□□□□□ -1.64
TO15178 AP000894.4-201ENST00000610185 483 ntBASIC4.8□□□□□ -1.64
TO15178 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.8□□□□□ -1.64
TO15178 AC024023.1-201ENST00000624530 922 ntBASIC4.8□□□□□ -1.64
TO15178 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TO15178 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
TO15178 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TO15178 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TO15178 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.8□□□□□ -1.64
TO15178 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TO15178 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.8□□□□□ -1.64
TO15178 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
TO15178 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TO15178 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.79□□□□□ -1.64
TO15178 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TO15178 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.79□□□□□ -1.64
TO15178 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TO15178 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
TO15178 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.79□□□□□ -1.64
TO15178 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TO15178 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TO15178 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TO15178 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TO15178 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TO15178 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TO15178 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.79□□□□□ -1.64
TO15178 RNU6-304P-201ENST00000364855 107 ntBASIC4.79□□□□□ -1.64
TO15178 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TO15178 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TO15178 MIR600-201ENST00000385007 98 ntBASIC4.79□□□□□ -1.64
TO15178 RPS27AP11-201ENST00000402798 447 ntBASIC4.79□□□□□ -1.64
TO15178 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.79□□□□□ -1.64
TO15178 AC010385.1-201ENST00000412374 256 ntBASIC4.79□□□□□ -1.64
TO15178 AL354692.1-201ENST00000423044 315 ntBASIC4.79□□□□□ -1.64
TO15178 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.79□□□□□ -1.64
TO15178 PNRC2P1-201ENST00000423940 420 ntBASIC4.79□□□□□ -1.64
TO15178 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.79□□□□□ -1.64
TO15178 FO393419.3-201ENST00000428741 282 ntBASIC4.79□□□□□ -1.64
TO15178 AC005033.1-201ENST00000428904 813 ntBASIC4.79□□□□□ -1.64
TO15178 RPL34P6-201ENST00000432390 345 ntBASIC4.79□□□□□ -1.64
TO15178 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.79□□□□□ -1.64
TO15178 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.79□□□□□ -1.64
TO15178 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.79□□□□□ -1.64
TO15178 OR52E3P-201ENST00000452083 936 ntBASIC4.79□□□□□ -1.64
TO15178 RPS20P4-201ENST00000461659 355 ntBASIC4.79□□□□□ -1.64
TO15178 RN7SL222P-201ENST00000476452 299 ntBASIC4.79□□□□□ -1.64
TO15178 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TO15178 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
TO15178 NAMPTP2-201ENST00000505629 1115 ntBASIC4.79□□□□□ -1.64
TO15178 AC097173.1-201ENST00000505862 819 ntBASIC4.79□□□□□ -1.64
TO15178 HIGD1AP14-201ENST00000507617 282 ntBASIC4.79□□□□□ -1.64
TO15178 MTCO3P27-201ENST00000514397 196 ntBASIC4.79□□□□□ -1.64
TO15178 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.79□□□□□ -1.64
TO15178 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
TO15178 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.79□□□□□ -1.64
TO15178 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.79□□□□□ -1.64
TO15178 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TO15178 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.79□□□□□ -1.64
TO15178 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.79□□□□□ -1.64
TO15178 GLRXP2-201ENST00000555594 321 ntBASIC4.79□□□□□ -1.64
TO15178 AC040958.1-201ENST00000561102 201 ntBASIC4.79□□□□□ -1.64
TO15178 AL109741.3-201ENST00000561748 592 ntBASIC4.79□□□□□ -1.64
TO15178 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TO15178 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.79□□□□□ -1.64
TO15178 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.79□□□□□ -1.64
TO15178 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.79□□□□□ -1.64
TO15178 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.79□□□□□ -1.64
TO15178 AC011447.4-201ENST00000587562 111 ntBASIC4.79□□□□□ -1.64
TO15178 AC079610.2-201ENST00000604818 690 ntBASIC4.79□□□□□ -1.64
TO15178 AC090948.2-201ENST00000607363 564 ntBASIC4.79□□□□□ -1.64
TO15178 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TO15178 AC131238.1-201ENST00000617135 328 ntBASIC4.79□□□□□ -1.64
TO15178 AC009704.2-201ENST00000618739 483 ntBASIC4.79□□□□□ -1.64
TO15178 AC010435.1-201ENST00000623353 1177 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms