Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UPK1AO00322 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
UPK1AO00322 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
UPK1AO00322 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.32□□□□□ -1.72
UPK1AO00322 AL391684.1-202ENST00000641293 1636 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UPK1AO00322 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
UPK1AO00322 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.31□□□□□ -1.72
UPK1AO00322 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.31□□□□□ -1.72
UPK1AO00322 AL929601.4-201ENST00000613011 1341 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
UPK1AO00322 SNORA58B-201ENST00000364259 136 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
UPK1AO00322 Z98745.1-201ENST00000402553 494 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.31□□□□□ -1.72
UPK1AO00322 SNORA81-201ENST00000408493 178 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.31□□□□□ -1.72
UPK1AO00322 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.31□□□□□ -1.72
UPK1AO00322 RPL36AP15-201ENST00000444514 266 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 VN1R96P-201ENST00000446052 858 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.31□□□□□ -1.72
UPK1AO00322 ISCUP1-201ENST00000454451 448 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 PSMC1P13-201ENST00000458195 985 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 SCARNA10-201ENST00000459255 330 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 AC006967.1-201ENST00000467608 589 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 AC104763.1-201ENST00000475274 360 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 AC008410.1-201ENST00000483777 339 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 AC105233.1-201ENST00000498840 781 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 PPBPP1-201ENST00000510807 373 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 RNA5SP360-201ENST00000516555 118 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 OR5D15P-201ENST00000531671 942 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
UPK1AO00322 AC051619.2-201ENST00000559063 397 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.31□□□□□ -1.72
UPK1AO00322 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.31□□□□□ -1.72
UPK1AO00322 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.31□□□□□ -1.72
UPK1AO00322 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.31□□□□□ -1.72
UPK1AO00322 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
UPK1AO00322 AP003072.5-201ENST00000623872 773 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 U3.53-201ENST00000628922 216 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
UPK1AO00322 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UPK1AO00322 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UPK1AO00322 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.31□□□□□ -1.72
UPK1AO00322 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UPK1AO00322 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
UPK1AO00322 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
UPK1AO00322 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
UPK1AO00322 MTCO1P15-201ENST00000529569 1526 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 KARSP3-201ENST00000571212 1504 ntBASIC4.31□□□□□ -1.72
UPK1AO00322 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
UPK1AO00322 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
UPK1AO00322 AC092111.2-201ENST00000611627 1414 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
UPK1AO00322 NAMPTP1-201ENST00000440465 2514 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
UPK1AO00322 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
UPK1AO00322 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.3□□□□□ -1.72
UPK1AO00322 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
UPK1AO00322 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
UPK1AO00322 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
UPK1AO00322 RPS24P12-201ENST00000402084 394 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 AL121834.1-202ENST00000404494 277 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 SMC4P1-201ENST00000414479 527 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.3□□□□□ -1.72
UPK1AO00322 GEMIN8P3-201ENST00000445417 720 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 RPL7L1P1-201ENST00000448259 785 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.3□□□□□ -1.72
UPK1AO00322 AL591363.1-201ENST00000450091 483 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 AL935212.3-201ENST00000450729 284 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 AC002553.2-201ENST00000453217 340 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 AC010469.1-201ENST00000463864 576 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.3□□□□□ -1.72
UPK1AO00322 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.3□□□□□ -1.72
UPK1AO00322 AC083982.1-201ENST00000485679 344 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 AC007016.1-201ENST00000512110 244 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.3□□□□□ -1.72
UPK1AO00322 AC015795.1-201ENST00000513669 327 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.3□□□□□ -1.72
UPK1AO00322 OR5M2P-201ENST00000529003 936 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.3□□□□□ -1.72
UPK1AO00322 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.3□□□□□ -1.72
UPK1AO00322 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.3□□□□□ -1.72
UPK1AO00322 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.3□□□□□ -1.72
UPK1AO00322 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.3□□□□□ -1.72
UPK1AO00322 AC091178.1-203ENST00000584586 279 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 AP002884.5-201ENST00000595053 1132 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 AC023762.1-201ENST00000603280 584 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 AC009237.17-201ENST00000618111 748 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
UPK1AO00322 AC091953.3-201ENST00000623220 236 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.3□□□□□ -1.72
UPK1AO00322 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
UPK1AO00322 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
UPK1AO00322 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
UPK1AO00322 AC139713.2-215ENST00000641428 5037 ntBASIC4.3□□□□□ -1.72
UPK1AO00322 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
UPK1AO00322 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
UPK1AO00322 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
UPK1AO00322 MAPK10-253ENST00000641010 4072 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms