Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.4□□□□□ -1.54
HMGB1P1B2RPK0 uc_338.33-201ENST00000614988 170 ntBASIC5.4□□□□□ -1.54
HMGB1P1B2RPK0 AC004801.6-201ENST00000616571 978 ntBASIC5.4□□□□□ -1.54
HMGB1P1B2RPK0 AC004825.2-201ENST00000616634 455 ntBASIC5.4□□□□□ -1.54
HMGB1P1B2RPK0 C2orf27A-204ENST00000623058 969 ntBASIC5.4□□□□□ -1.54
HMGB1P1B2RPK0 AC097460.3-201ENST00000623099 442 ntBASIC5.4□□□□□ -1.54
HMGB1P1B2RPK0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGB1P1B2RPK0 AL356118.1-201ENST00000635272 1078 ntBASIC5.4□□□□□ -1.54
HMGB1P1B2RPK0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.4□□□□□ -1.55
HMGB1P1B2RPK0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
HMGB1P1B2RPK0 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HMGB1P1B2RPK0 AC046144.1-201ENST00000478559 1853 ntBASIC5.4□□□□□ -1.55
HMGB1P1B2RPK0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
HMGB1P1B2RPK0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
HMGB1P1B2RPK0 OR11H5P-202ENST00000641612 1325 ntBASIC5.4□□□□□ -1.55
HMGB1P1B2RPK0 AP001273.1-201ENST00000624493 3152 ntBASIC5.4□□□□□ -1.55
HMGB1P1B2RPK0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.4□□□□□ -1.55
HMGB1P1B2RPK0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HMGB1P1B2RPK0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HMGB1P1B2RPK0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HMGB1P1B2RPK0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AC053481.2-202ENST00000582394 1500 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 RNU1-65P-201ENST00000363919 148 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 RNU6-356P-201ENST00000384140 107 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 MIR589-201ENST00000385238 99 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 ARSFP1-201ENST00000398758 477 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 RPL23AP59-201ENST00000399415 461 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 BX284632.2-201ENST00000421091 399 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AC241520.1-201ENST00000422654 1099 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 RPSAP32-201ENST00000432681 526 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AL512605.1-202ENST00000441919 381 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AL359955.2-201ENST00000445380 353 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AC092754.1-201ENST00000472975 479 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 GAPDHP36-201ENST00000480688 918 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AC073358.1-201ENST00000505671 684 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AC007016.1-201ENST00000512110 244 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 TCP11X3P-202ENST00000514289 1254 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 OR8L1P-201ENST00000534005 955 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AC027455.1-201ENST00000574104 594 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 ADAD1P2-201ENST00000588476 646 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 MIR6793-201ENST00000612376 63 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AL162574.2-201ENST00000614618 657 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 MIR8069-1-201ENST00000616627 86 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AC234782.5-201ENST00000617723 324 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AC245014.3-201ENST00000618589 347 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 MIR8069-2-201ENST00000621412 86 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AC095038.2-201ENST00000621464 1070 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 MIR4496-201ENST00000635896 61 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AL357140.4-201ENST00000636827 412 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 AL356489.2-201ENST00000566968 3528 ntBASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGB1P1B2RPK0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 EIF2AP4-201ENST00000424793 1781 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 RN7SKP146-201ENST00000410242 334 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 OR5AW1P-201ENST00000426334 1006 ntBASIC5.38□□□□□ -1.55
HMGB1P1B2RPK0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms