Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC106822.1-201ENST00000502647 526 ntBASIC6.2□□□□□ -1.42
CCDC66A2RUB6 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 AC113367.2-201ENST00000505749 160 ntBASIC6.2□□□□□ -1.42
CCDC66A2RUB6 MTCYBP37-201ENST00000510642 1133 ntBASIC6.2□□□□□ -1.42
CCDC66A2RUB6 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 MIR4701-201ENST00000583094 63 ntBASIC6.2□□□□□ -1.42
CCDC66A2RUB6 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 AL513327.3-201ENST00000602618 469 ntBASIC6.2□□□□□ -1.42
CCDC66A2RUB6 AP000238.1-201ENST00000608759 426 ntBASIC6.2□□□□□ -1.42
CCDC66A2RUB6 AC099676.1-201ENST00000608886 657 ntBASIC6.2□□□□□ -1.42
CCDC66A2RUB6 AC090246.1-201ENST00000616499 426 ntBASIC6.2□□□□□ -1.42
CCDC66A2RUB6 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 CASC19-222ENST00000641321 1173 ntBASIC6.2□□□□□ -1.42
CCDC66A2RUB6 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 OR55B1P-203ENST00000641518 2602 ntBASIC6.2□□□□□ -1.42
CCDC66A2RUB6 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC66A2RUB6 GNL2P1-201ENST00000451274 2190 ntBASIC6.2□□□□□ -1.42
CCDC66A2RUB6 NSRP1P1-201ENST00000444067 1693 ntBASIC6.2□□□□□ -1.42
CCDC66A2RUB6 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AL731566.1-201ENST00000620490 1937 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 UGT2B26P-201ENST00000508672 1613 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 FAM3C2-201ENST00000312214 681 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 RNA5SP110-201ENST00000362638 115 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 RNU6-666P-201ENST00000363499 107 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AL021407.1-201ENST00000404531 386 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 RNA5SP498-201ENST00000411342 120 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC099782.1-201ENST00000425889 474 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC009784.1-201ENST00000426484 460 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC098826.1-201ENST00000433943 471 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC234064.1-201ENST00000436312 247 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC073909.1-201ENST00000447112 999 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC009961.3-201ENST00000449832 765 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC097262.1-201ENST00000452559 548 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 RPL12P39-201ENST00000455456 496 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AL109741.2-201ENST00000455561 343 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 SYPL1P1-201ENST00000473622 768 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC104971.1-201ENST00000495117 578 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 MTND4P2-201ENST00000507767 1203 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 MTND5P13-201ENST00000513046 1079 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 RNU6-759P-201ENST00000516740 103 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 MIR2117-201ENST00000516780 80 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC124293.1-201ENST00000530034 493 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 NMNAT1P5-201ENST00000559657 841 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC016180.1-201ENST00000567945 403 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 MIR4271-201ENST00000582451 67 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC072039.2-201ENST00000608883 439 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC122133.1-201ENST00000613964 233 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AL591926.1-201ENST00000620542 217 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC091931.1-201ENST00000623488 728 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AL683826.1-201ENST00000624104 627 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AP003497.2-201ENST00000624220 967 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 AC087821.2-201ENST00000637086 450 ntBASIC6.19□□□□□ -1.42
CCDC66A2RUB6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CCDC66A2RUB6 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms