Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 BTF3P13-201ENST00000513224 490 ntBASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 TRAV11-201ENST00000539512 339 ntBASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 MTND4P26-201ENST00000415971 1359 ntBASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TRAPPC4Q9Y296 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
TRAPPC4Q9Y296 AC105074.1-201ENST00000623380 3095 ntBASIC4.34□□□□□ -1.72
TRAPPC4Q9Y296 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
TRAPPC4Q9Y296 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TRAPPC4Q9Y296 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TRAPPC4Q9Y296 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.72
TRAPPC4Q9Y296 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 CUL4AP1-201ENST00000514750 1863 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 NCLP2-201ENST00000416078 1462 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 ATG4AP1-201ENST00000416893 538 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 DYNLL1P7-201ENST00000429273 258 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AL450263.2-201ENST00000439400 589 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AC069285.2-201ENST00000440210 275 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 HIGD1AP8-201ENST00000453927 274 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AL356390.1-201ENST00000455684 397 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 CCNHP1-201ENST00000513311 678 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AC110775.1-201ENST00000513721 462 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 RNU1-6P-201ENST00000516290 144 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AC025857.1-201ENST00000525252 377 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 MORF4L1P3-201ENST00000525966 950 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AP001922.4-201ENST00000526967 290 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AC084759.1-201ENST00000561168 290 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 RN7SL802P-201ENST00000577858 299 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AC022726.1-201ENST00000587475 207 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AC011453.2-201ENST00000603737 729 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 LINC00901.1-201ENST00000617252 152 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AC090510.2-201ENST00000617465 629 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AL022401.1-201ENST00000619498 108 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AF117829.2-201ENST00000619538 361 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AP001005.3-201ENST00000622049 129 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AC011815.3-201ENST00000624194 473 ntBASIC4.33□□□□□ -1.72
TRAPPC4Q9Y296 AC093775.1-201ENST00000624154 1868 ntBASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 SAMMSON-226ENST00000642089 1582 ntBASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 GSTM3P2-201ENST00000412746 530 ntBASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 AC004938.1-201ENST00000438468 308 ntBASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 AC011753.3-201ENST00000443436 406 ntBASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 THAP12P8-201ENST00000447914 2115 ntBASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 MTCYBP14-201ENST00000457471 715 ntBASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 DYNLL1P4-201ENST00000549314 266 ntBASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 MTND2P17-201ENST00000550281 688 ntBASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 AC087477.6-201ENST00000559595 843 ntBASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 AL121834.1-201ENST00000572284 509 ntBASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 MIR5699-201ENST00000578903 90 ntBASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 AP005119.2-201ENST00000579735 1105 ntBASIC4.32□□□□□ -1.72
TRAPPC4Q9Y296 AC124856.1-201ENST00000600819 896 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms