Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 AC073429.2-201ENST00000569694 1444 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC010266.2-201ENST00000564741 3255 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 RNVU1-6-201ENST00000364688 164 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 ST13P16-201ENST00000401760 781 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 MTCO2P1-201ENST00000424648 477 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 USP9YP9-201ENST00000429406 715 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 MRPL50P1-201ENST00000431951 384 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC006466.1-201ENST00000438721 289 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 TCEA1P3-201ENST00000443005 880 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 OR1H1P-201ENST00000448731 937 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 RPS5P7-201ENST00000456664 608 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC093663.2-201ENST00000484625 313 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AK4P6-201ENST00000505168 528 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC091868.1-201ENST00000508746 304 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 SNORA76.2-201ENST00000517095 137 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC020937.1-201ENST00000519677 1013 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC138832.1-201ENST00000522871 556 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC008147.3-201ENST00000548666 354 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC133555.2-201ENST00000550213 292 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 MTND1P8-201ENST00000571424 950 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC091042.1-201ENST00000579213 173 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 MTATP6P2-201ENST00000603319 678 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC116651.1-201ENST00000609724 556 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 AC095038.2-201ENST00000621464 1070 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 CR382285.2-201ENST00000624662 1495 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 SDAD1P1-202ENST00000524156 2051 ntBASIC5.17□□□□□ -1.58
SIX4Q9UIU6 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.17□□□□□ -1.58
SIX4Q9UIU6 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 SOCS5P3-201ENST00000425115 1576 ntBASIC5.16□□□□□ -1.58
SIX4Q9UIU6 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 OR10AB1P-202ENST00000641219 1686 ntBASIC5.16□□□□□ -1.58
SIX4Q9UIU6 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 RN7SKP103-201ENST00000363848 320 ntBASIC5.16□□□□□ -1.58
SIX4Q9UIU6 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 MIR585-201ENST00000384887 94 ntBASIC5.16□□□□□ -1.58
SIX4Q9UIU6 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AL035419.1-201ENST00000397037 564 ntBASIC5.16□□□□□ -1.58
SIX4Q9UIU6 MTATP6P31-201ENST00000406985 692 ntBASIC5.16□□□□□ -1.58
SIX4Q9UIU6 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AC069282.1-201ENST00000411911 526 ntBASIC5.16□□□□□ -1.58
SIX4Q9UIU6 OR51B3P-201ENST00000412287 913 ntBASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AL139128.1-201ENST00000413921 941 ntBASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AC016769.2-201ENST00000414815 475 ntBASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 RGS17P1-201ENST00000423358 553 ntBASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AC005154.2-201ENST00000438110 379 ntBASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.16□□□□□ -1.58
SIX4Q9UIU6 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms