Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC018628.1-201ENST00000624147 3819 ntBASIC5.81□□□□□ -1.48
COL20A1Q9P218 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL20A1Q9P218 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
COL20A1Q9P218 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL20A1Q9P218 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL20A1Q9P218 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL20A1Q9P218 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL20A1Q9P218 NLRP3P1-201ENST00000622303 1785 ntBASIC5.8□□□□□ -1.48
COL20A1Q9P218 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL20A1Q9P218 SEPT7P7-201ENST00000420492 1301 ntBASIC5.8□□□□□ -1.48
COL20A1Q9P218 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL20A1Q9P218 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL20A1Q9P218 MIR137-201ENST00000385223 102 ntBASIC5.8□□□□□ -1.48
COL20A1Q9P218 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 RPL7P27-201ENST00000403775 720 ntBASIC5.8□□□□□ -1.48
COL20A1Q9P218 RPL5P19-201ENST00000404228 893 ntBASIC5.8□□□□□ -1.48
COL20A1Q9P218 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL20A1Q9P218 AC107015.1-201ENST00000466902 747 ntBASIC5.8□□□□□ -1.48
COL20A1Q9P218 RPS4XP6-201ENST00000477670 797 ntBASIC5.8□□□□□ -1.48
COL20A1Q9P218 RPL7P16-201ENST00000479738 738 ntBASIC5.8□□□□□ -1.48
COL20A1Q9P218 AC091544.1-201ENST00000484702 348 ntBASIC5.8□□□□□ -1.48
COL20A1Q9P218 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL20A1Q9P218 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 AC093720.1-201ENST00000505681 714 ntBASIC5.8□□□□□ -1.48
COL20A1Q9P218 AP001207.2-201ENST00000519490 539 ntBASIC5.8□□□□□ -1.48
COL20A1Q9P218 AC021006.3-201ENST00000530771 192 ntBASIC5.8□□□□□ -1.48
COL20A1Q9P218 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 AP001160.4-201ENST00000596971 382 ntBASIC5.8□□□□□ -1.48
COL20A1Q9P218 OR2BH1P-201ENST00000608850 864 ntBASIC5.8□□□□□ -1.48
COL20A1Q9P218 AL157392.4-201ENST00000609756 345 ntBASIC5.8□□□□□ -1.48
COL20A1Q9P218 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL20A1Q9P218 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL20A1Q9P218 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL20A1Q9P218 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL20A1Q9P218 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL20A1Q9P218 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL20A1Q9P218 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL20A1Q9P218 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL20A1Q9P218 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL20A1Q9P218 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL20A1Q9P218 RLIMP2-201ENST00000427891 1563 ntBASIC5.8□□□□□ -1.48
COL20A1Q9P218 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.8□□□□□ -1.48
COL20A1Q9P218 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL20A1Q9P218 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL20A1Q9P218 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL20A1Q9P218 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL20A1Q9P218 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL20A1Q9P218 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL20A1Q9P218 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL20A1Q9P218 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL20A1Q9P218 RNA5SP453-201ENST00000362503 119 ntBASIC5.79□□□□□ -1.48
COL20A1Q9P218 RN7SKP103-201ENST00000363848 320 ntBASIC5.79□□□□□ -1.48
COL20A1Q9P218 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 COX6B1P1-201ENST00000415962 213 ntBASIC5.79□□□□□ -1.48
COL20A1Q9P218 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 MTND2P5-201ENST00000432656 1006 ntBASIC5.79□□□□□ -1.48
COL20A1Q9P218 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 MTND1P33-201ENST00000446251 917 ntBASIC5.79□□□□□ -1.48
COL20A1Q9P218 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL20A1Q9P218 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 TCEA1P1-201ENST00000449716 880 ntBASIC5.79□□□□□ -1.48
COL20A1Q9P218 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 MTND2P8-201ENST00000450555 1025 ntBASIC5.79□□□□□ -1.48
COL20A1Q9P218 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 AC140172.1-201ENST00000502928 141 ntBASIC5.79□□□□□ -1.48
COL20A1Q9P218 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.79□□□□□ -1.48
COL20A1Q9P218 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.79□□□□□ -1.48
COL20A1Q9P218 Y_RNA.717-201ENST00000517106 92 ntBASIC5.79□□□□□ -1.48
COL20A1Q9P218 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 AC009117.1-201ENST00000563948 554 ntBASIC5.79□□□□□ -1.48
COL20A1Q9P218 AC019322.1-201ENST00000571869 389 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms