Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 OR9G4-201ENST00000302957 984 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 RN7SKP153-201ENST00000365026 316 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 U3.36-201ENST00000408418 213 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 XKRYP4-201ENST00000414395 483 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 AL158050.1-201ENST00000416077 457 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 VN1R42P-201ENST00000424651 344 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 AC012512.1-201ENST00000446594 718 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 XKRYP5-201ENST00000449659 483 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 AC092754.1-201ENST00000472975 479 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 CBX1P5-201ENST00000475330 559 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 AC068587.2-201ENST00000478386 781 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 AC020779.1-201ENST00000478757 796 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 RPL7P6-201ENST00000480903 738 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 PPM1AP1-201ENST00000502740 1135 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 MYL12BP2-201ENST00000503948 512 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 AL132657.2-201ENST00000564417 358 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 AC090666.1-201ENST00000578241 445 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 MIR3936-201ENST00000584304 110 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 AC009027.1-201ENST00000604510 479 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 AC140725.3-201ENST00000616193 880 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 MTND5P11-201ENST00000511037 1812 ntBASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NCKIPSDQ9NZQ3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 MTCO1P7-201ENST00000419523 1542 ntBASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 RNU6-252P-201ENST00000363232 107 ntBASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 SNORA16A-201ENST00000384342 137 ntBASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AL133388.1-201ENST00000404509 287 ntBASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AC211486.3-201ENST00000412694 621 ntBASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 RPL12P9-201ENST00000412942 488 ntBASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AL139128.1-201ENST00000413921 941 ntBASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 OR6K4P-201ENST00000423179 955 ntBASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 CACYBPP1-201ENST00000438592 684 ntBASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 RPS27P5-201ENST00000444247 244 ntBASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 OTX2P1-201ENST00000450956 354 ntBASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AC104164.3-201ENST00000467363 1258 ntBASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AC104982.1-201ENST00000478775 574 ntBASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 NDUFB5P1-201ENST00000508134 564 ntBASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 AC121161.1-201ENST00000510606 652 ntBASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 RN7SKP66-201ENST00000516681 231 ntBASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 BUD31P1-201ENST00000521828 359 ntBASIC5.28□□□□□ -1.56
NCKIPSDQ9NZQ3 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms