Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TM9SF3Q9HD45 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 RN7SKP100-201ENST00000411258 284 ntBASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 TRIM60P17-201ENST00000415181 719 ntBASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 C4BPAP2-201ENST00000428434 478 ntBASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 AC091390.1-201ENST00000433904 331 ntBASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 RPL36AP15-201ENST00000444514 266 ntBASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 RPS6P2-201ENST00000454208 705 ntBASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 AC011005.3-201ENST00000491624 395 ntBASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 AF186190.1-201ENST00000517470 480 ntBASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 C1GALT1P3-201ENST00000522049 819 ntBASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 AC020910.3-201ENST00000603701 874 ntBASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 RMST_5.1-201ENST00000618704 126 ntBASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 BX005214.3-202ENST00000619809 325 ntBASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 AL133370.2-201ENST00000619934 439 ntBASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 AC145207.9-201ENST00000623802 325 ntBASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TM9SF3Q9HD45 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AC083843.3-201ENST00000623679 2186 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 CASC19-204ENST00000641001 2055 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 MT-TP-201ENST00000387461 68 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AL136116.2-201ENST00000404020 785 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 COX6CP17-201ENST00000421389 185 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AC016712.1-201ENST00000431088 378 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AC093716.1-201ENST00000435923 377 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 CACYBPP1-201ENST00000438592 684 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AL591473.1-201ENST00000464297 313 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 PPIAP21-201ENST00000464473 501 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 FTH1P2-201ENST00000466086 412 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AP000926.3-201ENST00000497201 299 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 CCNHP1-201ENST00000513311 678 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AC138938.1-201ENST00000515431 782 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AC093591.2-201ENST00000565254 3843 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AC133552.5-201ENST00000604266 540 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AC012414.7-202ENST00000622705 1090 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 BMS1P21-201ENST00000634565 365 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms