Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RN7SL753P-201ENST00000581238 290 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 AC022726.1-201ENST00000587475 207 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 AC011453.2-201ENST00000603737 729 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 IMMP1LP1-201ENST00000605170 488 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 AC145207.9-201ENST00000623802 325 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LRRC40Q9H9A6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
LRRC40Q9H9A6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 NCLP2-201ENST00000416078 1462 ntBASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 RARSP1-201ENST00000542842 1418 ntBASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 AC109780.1-201ENST00000451768 1344 ntBASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 RNA5SP123-201ENST00000363244 119 ntBASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 AL080315.1-201ENST00000406055 466 ntBASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 RPL7P57-201ENST00000423238 740 ntBASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 AL645608.4-201ENST00000423619 154 ntBASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 CCDC75P1-201ENST00000469247 791 ntBASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 RPL7AP6-201ENST00000477943 801 ntBASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 AC008033.2-201ENST00000542626 177 ntBASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 AC079075.1-201ENST00000559543 878 ntBASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 FAM27B-201ENST00000610601 213 ntBASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 AC005332.5-201ENST00000591222 2919 ntBASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 AL672167.1-205ENST00000641112 3080 ntBASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC40Q9H9A6 SAMMSON-226ENST00000642089 1582 ntBASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 AC007382.1-201ENST00000624376 2618 ntBASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 AL136164.3-201ENST00000624429 3978 ntBASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 RN7SKP104-201ENST00000362605 328 ntBASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 RPL6P29-201ENST00000414863 865 ntBASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 OR2AM1P-201ENST00000422137 422 ntBASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 NPM1P26-201ENST00000426339 738 ntBASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 AL627308.1-201ENST00000435693 821 ntBASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 TDGF1P1-201ENST00000445734 527 ntBASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 RPS5P7-201ENST00000456664 608 ntBASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 AC104971.1-201ENST00000495117 578 ntBASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 BTF3P13-201ENST00000513224 490 ntBASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 SNORD91B-202ENST00000608459 222 ntBASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 AC234782.5-201ENST00000617723 324 ntBASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.82□□□□□ -1.64
LRRC40Q9H9A6 AC000123.3-201ENST00000624029 4975 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms