Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM4Q9C037 AC092747.4-201ENST00000620519 1861 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM4Q9C037 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM4Q9C037 RN7SKP227-201ENST00000364445 330 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 GCNT6-201ENST00000379591 934 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 SNORD96B-201ENST00000386148 79 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 HSPA8P15-201ENST00000401676 786 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 HDGFP1-201ENST00000405943 252 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 EIF4EP1-201ENST00000422311 642 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 IPMKP1-201ENST00000425988 855 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 RSL24D1P6-201ENST00000426934 401 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.88□□□□□ -1.63
TRIM4Q9C037 ARAFP2-201ENST00000440565 559 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 AC133473.1-201ENST00000455173 299 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
TRIM4Q9C037 RN7SL189P-201ENST00000468631 289 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 BTF3P13-201ENST00000513224 490 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM4Q9C037 MTCYBP19-201ENST00000517463 1124 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 MYL12AP1-201ENST00000518490 515 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM4Q9C037 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
TRIM4Q9C037 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM4Q9C037 PDCD5P1-201ENST00000543528 309 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM4Q9C037 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM4Q9C037 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM4Q9C037 AC011447.4-201ENST00000587562 111 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.88□□□□□ -1.63
TRIM4Q9C037 AC068254.2-201ENST00000623938 3577 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM4Q9C037 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM4Q9C037 AC012020.1-201ENST00000624541 1728 ntBASIC4.88□□□□□ -1.63
TRIM4Q9C037 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM4Q9C037 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM4Q9C037 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
TRIM4Q9C037 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM4Q9C037 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM4Q9C037 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM4Q9C037 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM4Q9C037 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 CDY11P-201ENST00000447168 1651 ntBASIC4.87□□□□□ -1.63
TRIM4Q9C037 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM4Q9C037 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM4Q9C037 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM4Q9C037 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM4Q9C037 MIR105-1-201ENST00000385222 81 ntBASIC4.87□□□□□ -1.63
TRIM4Q9C037 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 RNA5SP332-201ENST00000391063 115 ntBASIC4.87□□□□□ -1.63
TRIM4Q9C037 SEPT7P8-201ENST00000413308 775 ntBASIC4.87□□□□□ -1.63
TRIM4Q9C037 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 FABP7P1-201ENST00000424004 391 ntBASIC4.87□□□□□ -1.63
TRIM4Q9C037 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 KCTD10P1-201ENST00000434203 625 ntBASIC4.87□□□□□ -1.63
TRIM4Q9C037 PTMAP3-201ENST00000447474 330 ntBASIC4.87□□□□□ -1.63
TRIM4Q9C037 AC063943.1-201ENST00000465434 453 ntBASIC4.87□□□□□ -1.63
TRIM4Q9C037 RPS4XP20-201ENST00000505751 772 ntBASIC4.87□□□□□ -1.63
TRIM4Q9C037 AC097173.1-201ENST00000505862 819 ntBASIC4.87□□□□□ -1.63
TRIM4Q9C037 AC093824.1-201ENST00000508796 343 ntBASIC4.87□□□□□ -1.63
TRIM4Q9C037 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM4Q9C037 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM4Q9C037 AC007066.2-202ENST00000566531 914 ntBASIC4.87□□□□□ -1.63
TRIM4Q9C037 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 AL445423.1-201ENST00000609941 536 ntBASIC4.87□□□□□ -1.63
TRIM4Q9C037 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 AC093535.2-201ENST00000624769 2326 ntBASIC4.87□□□□□ -1.63
TRIM4Q9C037 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM4Q9C037 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM4Q9C037 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 MFSD8-216ENST00000641147 4009 ntBASIC4.87□□□□□ -1.63
TRIM4Q9C037 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM4Q9C037 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM4Q9C037 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM4Q9C037 AC017104.4-201ENST00000636283 1592 ntBASIC4.87□□□□□ -1.63
TRIM4Q9C037 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM4Q9C037 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM4Q9C037 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM4Q9C037 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 MIR448-201ENST00000362131 111 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 RN7SKP95-201ENST00000362860 303 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 RNA5SP372-201ENST00000390836 115 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms