Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ABCA3Q99758 RLIMP1-201ENST00000339626 1680 ntBASIC5.89□□□□□ -1.47
ABCA3Q99758 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
ABCA3Q99758 AC018644.1-201ENST00000429934 551 ntBASIC5.88□□□□□ -1.47
ABCA3Q99758 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.88□□□□□ -1.47
ABCA3Q99758 GOT2P5-201ENST00000433995 546 ntBASIC5.88□□□□□ -1.47
ABCA3Q99758 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.88□□□□□ -1.47
ABCA3Q99758 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.88□□□□□ -1.47
ABCA3Q99758 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.88□□□□□ -1.47
ABCA3Q99758 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.88□□□□□ -1.47
ABCA3Q99758 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.88□□□□□ -1.47
ABCA3Q99758 AC015804.1-201ENST00000622935 435 ntBASIC5.88□□□□□ -1.47
ABCA3Q99758 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
ABCA3Q99758 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ABCA3Q99758 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
ABCA3Q99758 AL133243.3-201ENST00000617415 3004 ntBASIC5.88□□□□□ -1.47
ABCA3Q99758 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
ABCA3Q99758 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
ABCA3Q99758 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.88□□□□□ -1.47
ABCA3Q99758 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ABCA3Q99758 RNA5SP119-201ENST00000362715 117 ntBASIC5.88□□□□□ -1.47
ABCA3Q99758 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
ABCA3Q99758 RNA5SP36-201ENST00000410197 133 ntBASIC5.88□□□□□ -1.47
ABCA3Q99758 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.88□□□□□ -1.47
ABCA3Q99758 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
ABCA3Q99758 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ABCA3Q99758 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ABCA3Q99758 EIF2S2P5-201ENST00000457635 968 ntBASIC5.88□□□□□ -1.47
ABCA3Q99758 RPS20P4-201ENST00000461659 355 ntBASIC5.88□□□□□ -1.47
ABCA3Q99758 AC091564.1-201ENST00000464563 479 ntBASIC5.88□□□□□ -1.47
ABCA3Q99758 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
ABCA3Q99758 AL121772.2-201ENST00000614331 297 ntBASIC5.88□□□□□ -1.47
ABCA3Q99758 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.88□□□□□ -1.47
ABCA3Q99758 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
ABCA3Q99758 AC007159.1-201ENST00000566529 4706 ntBASIC5.87□□□□□ -1.47
ABCA3Q99758 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.87□□□□□ -1.47
ABCA3Q99758 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
ABCA3Q99758 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.87□□□□□ -1.47
ABCA3Q99758 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ABCA3Q99758 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.87□□□□□ -1.47
ABCA3Q99758 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.87□□□□□ -1.47
ABCA3Q99758 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.87□□□□□ -1.47
ABCA3Q99758 RPEP2-201ENST00000432149 701 ntBASIC5.87□□□□□ -1.47
ABCA3Q99758 MRPS21P3-201ENST00000436696 262 ntBASIC5.87□□□□□ -1.47
ABCA3Q99758 PTMAP3-201ENST00000447474 330 ntBASIC5.87□□□□□ -1.47
ABCA3Q99758 AC104164.2-201ENST00000496953 495 ntBASIC5.87□□□□□ -1.47
ABCA3Q99758 AC099522.1-202ENST00000514718 367 ntBASIC5.87□□□□□ -1.47
ABCA3Q99758 SNORA74D-201ENST00000516404 141 ntBASIC5.87□□□□□ -1.47
ABCA3Q99758 AC026403.1-201ENST00000518938 295 ntBASIC5.87□□□□□ -1.47
ABCA3Q99758 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.87□□□□□ -1.47
ABCA3Q99758 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.87□□□□□ -1.47
ABCA3Q99758 RN7SL339P-201ENST00000580597 296 ntBASIC5.87□□□□□ -1.47
ABCA3Q99758 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ABCA3Q99758 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ABCA3Q99758 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.87□□□□□ -1.47
ABCA3Q99758 AC092376.2-201ENST00000622621 4116 ntBASIC5.87□□□□□ -1.47
ABCA3Q99758 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ABCA3Q99758 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ABCA3Q99758 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.86□□□□□ -1.47
ABCA3Q99758 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
ABCA3Q99758 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
ABCA3Q99758 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ABCA3Q99758 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ABCA3Q99758 RNA5SP513-201ENST00000364648 118 ntBASIC5.86□□□□□ -1.47
ABCA3Q99758 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ABCA3Q99758 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.86□□□□□ -1.47
ABCA3Q99758 ARAFP2-201ENST00000440565 559 ntBASIC5.86□□□□□ -1.47
ABCA3Q99758 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.86□□□□□ -1.47
ABCA3Q99758 DYNLL1P4-201ENST00000549314 266 ntBASIC5.86□□□□□ -1.47
ABCA3Q99758 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.86□□□□□ -1.47
ABCA3Q99758 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.86□□□□□ -1.47
ABCA3Q99758 AC112484.5-201ENST00000624189 228 ntBASIC5.86□□□□□ -1.47
ABCA3Q99758 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.86□□□□□ -1.47
ABCA3Q99758 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ABCA3Q99758 AC139769.1-204ENST00000472297 1931 ntBASIC5.86□□□□□ -1.47
ABCA3Q99758 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
ABCA3Q99758 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.86□□□□□ -1.47
ABCA3Q99758 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
ABCA3Q99758 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.86□□□□□ -1.47
ABCA3Q99758 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.86□□□□□ -1.47
ABCA3Q99758 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ABCA3Q99758 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
ABCA3Q99758 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.86□□□□□ -1.47
ABCA3Q99758 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
ABCA3Q99758 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ABCA3Q99758 RNA5SP372-201ENST00000390836 115 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 PTMAP2-201ENST00000397627 327 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.85□□□□□ -1.47
ABCA3Q99758 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.85□□□□□ -1.47
ABCA3Q99758 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.85□□□□□ -1.47
ABCA3Q99758 AL592156.1-201ENST00000508758 304 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 AC007991.1-201ENST00000522680 631 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.85□□□□□ -1.47
ABCA3Q99758 AC012314.7-201ENST00000619693 93 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 AC244100.1-202ENST00000621554 382 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 AP000648.2-201ENST00000624182 404 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 FP325313.1-201ENST00000638228 703 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ABCA3Q99758 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.85□□□□□ -1.47
ABCA3Q99758 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms