Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC7.4□□□□□ -1.22
IFT140Q96RY7 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
IFT140Q96RY7 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
IFT140Q96RY7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC7.4□□□□□ -1.22
IFT140Q96RY7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
IFT140Q96RY7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
IFT140Q96RY7 ENSAP1-201ENST00000392855 326 ntBASIC7.4□□□□□ -1.22
IFT140Q96RY7 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC7.4□□□□□ -1.22
IFT140Q96RY7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC7.4□□□□□ -1.22
IFT140Q96RY7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.4□□□□□ -1.22
IFT140Q96RY7 AC099522.1-202ENST00000514718 367 ntBASIC7.4□□□□□ -1.22
IFT140Q96RY7 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC7.4□□□□□ -1.22
IFT140Q96RY7 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC7.4□□□□□ -1.22
IFT140Q96RY7 MRPS21P9-201ENST00000571150 257 ntBASIC7.4□□□□□ -1.22
IFT140Q96RY7 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC7.4□□□□□ -1.22
IFT140Q96RY7 AC090912.3-201ENST00000609775 533 ntBASIC7.4□□□□□ -1.22
IFT140Q96RY7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
IFT140Q96RY7 AL445363.3-201ENST00000623080 671 ntBASIC7.4□□□□□ -1.22
IFT140Q96RY7 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
IFT140Q96RY7 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
IFT140Q96RY7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.23
IFT140Q96RY7 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
IFT140Q96RY7 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
IFT140Q96RY7 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
IFT140Q96RY7 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
IFT140Q96RY7 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.39□□□□□ -1.23
IFT140Q96RY7 AC032011.1-201ENST00000611703 1549 ntBASIC7.39□□□□□ -1.23
IFT140Q96RY7 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.39□□□□□ -1.23
IFT140Q96RY7 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
IFT140Q96RY7 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
IFT140Q96RY7 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
IFT140Q96RY7 MIR200C-201ENST00000384980 68 ntBASIC7.39□□□□□ -1.23
IFT140Q96RY7 TCEA1P4-201ENST00000415066 844 ntBASIC7.39□□□□□ -1.23
IFT140Q96RY7 NPM1P36-201ENST00000415681 835 ntBASIC7.39□□□□□ -1.23
IFT140Q96RY7 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC7.39□□□□□ -1.23
IFT140Q96RY7 COX6B1P7-201ENST00000430845 235 ntBASIC7.39□□□□□ -1.23
IFT140Q96RY7 MTND2P40-201ENST00000436718 841 ntBASIC7.39□□□□□ -1.23
IFT140Q96RY7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC7.39□□□□□ -1.23
IFT140Q96RY7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC7.39□□□□□ -1.23
IFT140Q96RY7 AC099669.2-201ENST00000616549 437 ntBASIC7.39□□□□□ -1.23
IFT140Q96RY7 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
IFT140Q96RY7 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
IFT140Q96RY7 AL669831.5-218ENST00000591702 1873 ntBASIC7.39□□□□□ -1.23
IFT140Q96RY7 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
IFT140Q96RY7 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
IFT140Q96RY7 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
IFT140Q96RY7 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
IFT140Q96RY7 AL137058.3-201ENST00000624531 3099 ntBASIC7.38□□□□□ -1.23
IFT140Q96RY7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
IFT140Q96RY7 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC7.38□□□□□ -1.23
IFT140Q96RY7 AC233289.1-201ENST00000403700 508 ntBASIC7.38□□□□□ -1.23
IFT140Q96RY7 OR52E3P-201ENST00000452083 936 ntBASIC7.38□□□□□ -1.23
IFT140Q96RY7 AC093166.2-201ENST00000455969 1017 ntBASIC7.38□□□□□ -1.23
IFT140Q96RY7 AL592156.1-201ENST00000508758 304 ntBASIC7.38□□□□□ -1.23
IFT140Q96RY7 AC005868.1-201ENST00000536421 331 ntBASIC7.38□□□□□ -1.23
IFT140Q96RY7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC7.38□□□□□ -1.23
IFT140Q96RY7 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC7.38□□□□□ -1.23
IFT140Q96RY7 AC084757.4-201ENST00000616350 526 ntBASIC7.38□□□□□ -1.23
IFT140Q96RY7 AC243756.2-201ENST00000618406 463 ntBASIC7.38□□□□□ -1.23
IFT140Q96RY7 AC007546.1-201ENST00000619452 559 ntBASIC7.38□□□□□ -1.23
IFT140Q96RY7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC7.38□□□□□ -1.23
IFT140Q96RY7 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC7.38□□□□□ -1.23
IFT140Q96RY7 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
IFT140Q96RY7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
IFT140Q96RY7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC7.38□□□□□ -1.23
IFT140Q96RY7 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC7.38□□□□□ -1.23
IFT140Q96RY7 AC099654.3-201ENST00000447087 1546 ntBASIC7.38□□□□□ -1.23
IFT140Q96RY7 BCORP1-203ENST00000513194 5093 ntBASIC7.38□□□□□ -1.23
IFT140Q96RY7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
IFT140Q96RY7 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.38□□□□□ -1.23
IFT140Q96RY7 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
IFT140Q96RY7 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
IFT140Q96RY7 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
IFT140Q96RY7 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.37□□□□□ -1.23
IFT140Q96RY7 SNORA73.2-201ENST00000364946 201 ntBASIC7.37□□□□□ -1.23
IFT140Q96RY7 MIR7-3-201ENST00000384898 110 ntBASIC7.37□□□□□ -1.23
IFT140Q96RY7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC7.37□□□□□ -1.23
IFT140Q96RY7 AC021876.1-201ENST00000425959 359 ntBASIC7.37□□□□□ -1.23
IFT140Q96RY7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC7.37□□□□□ -1.23
IFT140Q96RY7 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
IFT140Q96RY7 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC7.37□□□□□ -1.23
IFT140Q96RY7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC7.37□□□□□ -1.23
IFT140Q96RY7 MIR3200-201ENST00000580767 85 ntBASIC7.37□□□□□ -1.23
IFT140Q96RY7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC7.37□□□□□ -1.23
IFT140Q96RY7 AC012314.7-201ENST00000619693 93 ntBASIC7.37□□□□□ -1.23
IFT140Q96RY7 AC004817.4-201ENST00000602396 3625 ntBASIC7.37□□□□□ -1.23
IFT140Q96RY7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
IFT140Q96RY7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
IFT140Q96RY7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
IFT140Q96RY7 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC7.37□□□□□ -1.23
IFT140Q96RY7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC7.37□□□□□ -1.23
IFT140Q96RY7 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
IFT140Q96RY7 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
IFT140Q96RY7 TRIM51GP-201ENST00000534741 1350 ntBASIC7.37□□□□□ -1.23
IFT140Q96RY7 DHX9P1-201ENST00000436565 3076 ntBASIC7.37□□□□□ -1.23
IFT140Q96RY7 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.37□□□□□ -1.23
IFT140Q96RY7 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
IFT140Q96RY7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
IFT140Q96RY7 RNU1-14P-201ENST00000362759 152 ntBASIC7.36□□□□□ -1.23
IFT140Q96RY7 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms