Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC063943.1-201ENST00000465434 453 ntBASIC4.8□□□□□ -1.64
C9orf72Q96LT7 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 CYCSP28-201ENST00000534284 321 ntBASIC4.8□□□□□ -1.64
C9orf72Q96LT7 CR383656.6-201ENST00000550518 394 ntBASIC4.8□□□□□ -1.64
C9orf72Q96LT7 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 AC087283.1-201ENST00000604029 1074 ntBASIC4.8□□□□□ -1.64
C9orf72Q96LT7 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 AC007497.1-201ENST00000610421 561 ntBASIC4.8□□□□□ -1.64
C9orf72Q96LT7 AC138627.1-204ENST00000641894 765 ntBASIC4.8□□□□□ -1.64
C9orf72Q96LT7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AL355852.1-201ENST00000454081 1771 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 RNU6-729P-201ENST00000384399 107 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 RNU1-82P-201ENST00000390851 165 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AL590762.2-201ENST00000395798 571 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 CYB5AP4-201ENST00000396692 399 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 MIR921-201ENST00000401133 56 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AC009237.10-201ENST00000414112 510 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AC007559.1-201ENST00000428736 355 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 RPS6P2-201ENST00000454208 705 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 ATP5G1P3-201ENST00000463301 410 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 IGLV2-34-201ENST00000490007 283 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 OR7H2P-201ENST00000513483 306 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AC008147.3-201ENST00000548666 354 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 UBE2FP2-201ENST00000566646 462 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 RN7SL802P-201ENST00000577858 299 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 MIR5699-201ENST00000578903 90 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 MIR3667-201ENST00000581025 74 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AL713998.2-201ENST00000604538 1198 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AC091979.2-201ENST00000607514 214 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AL353600.1-201ENST00000608148 251 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 OR7M1P-201ENST00000608946 533 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 CASC19-204ENST00000641001 2055 ntBASIC4.79□□□□□ -1.64
C9orf72Q96LT7 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.79□□□□□ -1.64
C9orf72Q96LT7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 RNVU1-6-201ENST00000364688 164 ntBASIC4.78□□□□□ -1.64
C9orf72Q96LT7 U3.30-201ENST00000391308 210 ntBASIC4.78□□□□□ -1.64
C9orf72Q96LT7 GLUD1P9-201ENST00000420997 1173 ntBASIC4.78□□□□□ -1.64
C9orf72Q96LT7 AC004448.2-201ENST00000422360 586 ntBASIC4.78□□□□□ -1.64
C9orf72Q96LT7 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 H2AFZP6-201ENST00000444403 394 ntBASIC4.78□□□□□ -1.64
C9orf72Q96LT7 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 MORF4L1P3-201ENST00000525966 950 ntBASIC4.78□□□□□ -1.64
C9orf72Q96LT7 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 AC137768.1-201ENST00000549998 553 ntBASIC4.78□□□□□ -1.64
C9orf72Q96LT7 AC133555.2-201ENST00000550213 292 ntBASIC4.78□□□□□ -1.64
C9orf72Q96LT7 AC063949.1-201ENST00000552900 865 ntBASIC4.78□□□□□ -1.64
C9orf72Q96LT7 MIR4675-201ENST00000577898 77 ntBASIC4.78□□□□□ -1.64
C9orf72Q96LT7 RN7SL52P-201ENST00000584271 284 ntBASIC4.78□□□□□ -1.64
C9orf72Q96LT7 AC022726.1-201ENST00000587475 207 ntBASIC4.78□□□□□ -1.64
C9orf72Q96LT7 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 AC011815.3-201ENST00000624194 473 ntBASIC4.78□□□□□ -1.64
C9orf72Q96LT7 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.78□□□□□ -1.64
C9orf72Q96LT7 THAP12P8-201ENST00000447914 2115 ntBASIC4.78□□□□□ -1.64
C9orf72Q96LT7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.78□□□□□ -1.64
C9orf72Q96LT7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms