Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 OR4K15-201ENST00000305051 1216 ntBASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 RNA5SP505-201ENST00000364748 108 ntBASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 RPL26P29-201ENST00000415623 438 ntBASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 OR2AH1P-201ENST00000425717 928 ntBASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 YWHAZP2-201ENST00000440317 728 ntBASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 AC007016.1-201ENST00000512110 244 ntBASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 MIR4330-201ENST00000579077 105 ntBASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 VN1R81P-201ENST00000602085 372 ntBASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 U3.53-201ENST00000628922 216 ntBASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.68□□□□□ -1.66
ECHDC3Q96DC8 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 RPS3AP23-201ENST00000401762 784 ntBASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 RPS4XP9-201ENST00000405151 780 ntBASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 AC098592.2-201ENST00000413158 265 ntBASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 VN1R31P-201ENST00000417498 730 ntBASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 AC245028.1-201ENST00000423259 256 ntBASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 SCARNA10-201ENST00000459255 330 ntBASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 RN7SL354P-201ENST00000469282 294 ntBASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 NIP7P2-201ENST00000485801 544 ntBASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 RN7SL346P-201ENST00000491561 294 ntBASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 RPL23AP72-201ENST00000492447 435 ntBASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 OR5AN2P-201ENST00000534535 896 ntBASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 SNORD39.2-201ENST00000579995 76 ntBASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ECHDC3Q96DC8 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 HSPA8P17-201ENST00000427029 1382 ntBASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 Z98745.1-201ENST00000402553 494 ntBASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 RPA2P2-201ENST00000419698 796 ntBASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 TRGV7-201ENST00000427089 353 ntBASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 TDGF1P1-201ENST00000445734 527 ntBASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 NPM1P39-201ENST00000449818 867 ntBASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 HSPE1P22-201ENST00000456856 327 ntBASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 MTND6P32-201ENST00000457611 483 ntBASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 AP001960.1-201ENST00000506494 658 ntBASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.66□□□□□ -1.66
ECHDC3Q96DC8 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms