Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 SEC63P1-201ENST00000425785 1258 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 AL445433.1-201ENST00000457507 257 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 RPL5P16-201ENST00000471467 790 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 AC109462.1-201ENST00000491087 368 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 SCARNA21.2-201ENST00000516600 166 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 RNA5SP34-201ENST00000516887 130 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 GCSHP4-201ENST00000538792 439 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 HAUS8P1-201ENST00000549005 542 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 AC133555.2-201ENST00000550213 292 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 AC079075.1-201ENST00000559543 878 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 HNRNPCP4-201ENST00000571636 900 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 GMCL1P2-201ENST00000605230 823 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 AP000894.4-201ENST00000610185 483 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 AP006248.2-201ENST00000623309 592 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 UGT2B26P-201ENST00000508672 1613 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 AC132825.1-201ENST00000463573 2247 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 SNORA51.1-201ENST00000363243 140 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 RNU6-146P-201ENST00000384602 108 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 GTF3AP1-201ENST00000416942 1004 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 AL645608.4-201ENST00000423619 154 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 OR2B7P-201ENST00000429302 934 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 RPS26P2-201ENST00000440331 348 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 AC112498.1-201ENST00000444401 332 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 Z80107.2-201ENST00000445127 392 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 SLC25A18P1-201ENST00000449385 454 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 PPIAP21-201ENST00000464473 501 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 AC091868.1-201ENST00000508746 304 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 AC110775.1-201ENST00000513721 462 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 AC125612.1-201ENST00000547580 377 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 AC130352.1-201ENST00000602979 661 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 AC007497.1-201ENST00000610421 561 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 AL121612.2-201ENST00000612261 482 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 Z73965.1-201ENST00000623412 2297 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 DHX9P1-201ENST00000436565 3076 ntBASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLHC1Q8NHS4 SAMMSON-226ENST00000642089 1582 ntBASIC4.53□□□□□ -1.69
CLHC1Q8NHS4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 MIR765-201ENST00000390226 114 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 RPL12P34-201ENST00000424532 479 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 PRPF38AP2-201ENST00000438179 851 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 AC073850.1-201ENST00000449243 255 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 AC114982.2-201ENST00000461396 358 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 RPSAP50-201ENST00000481955 852 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 RN7SL727P-201ENST00000482164 296 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 HAUS1P1-201ENST00000505275 832 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 AC006499.3-201ENST00000506077 748 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 HMGB3P13-201ENST00000511263 607 ntBASIC4.52□□□□□ -1.69
CLHC1Q8NHS4 BTF3P13-201ENST00000513224 490 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms