Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC090686.1-201ENST00000481577 749 ntBASIC5.66□□□□□ -1.5
RTL9Q8NET4 RN7SL810P-201ENST00000493031 276 ntBASIC5.66□□□□□ -1.5
RTL9Q8NET4 AC087477.6-201ENST00000559595 843 ntBASIC5.66□□□□□ -1.5
RTL9Q8NET4 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.66□□□□□ -1.5
RTL9Q8NET4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.66□□□□□ -1.5
RTL9Q8NET4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTL9Q8NET4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTL9Q8NET4 ICE2P1-201ENST00000512800 1849 ntBASIC5.66□□□□□ -1.5
RTL9Q8NET4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RTL9Q8NET4 AC025031.4-201ENST00000621248 3271 ntBASIC5.65□□□□□ -1.5
RTL9Q8NET4 LINC00622-201ENST00000562811 1570 ntBASIC5.65□□□□□ -1.5
RTL9Q8NET4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RTL9Q8NET4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RTL9Q8NET4 SMG1P4-204ENST00000523028 4131 ntBASIC5.65□□□□□ -1.5
RTL9Q8NET4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RTL9Q8NET4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.65□□□□□ -1.5
RTL9Q8NET4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RTL9Q8NET4 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.65□□□□□ -1.51
RTL9Q8NET4 TCP11X1-202ENST00000622971 1372 ntBASIC5.65□□□□□ -1.51
RTL9Q8NET4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RTL9Q8NET4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
RTL9Q8NET4 TMSB10P2-201ENST00000416049 131 ntBASIC5.65□□□□□ -1.51
RTL9Q8NET4 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.65□□□□□ -1.51
RTL9Q8NET4 RPL23AP93-201ENST00000440847 484 ntBASIC5.65□□□□□ -1.51
RTL9Q8NET4 AC053481.1-201ENST00000467217 306 ntBASIC5.65□□□□□ -1.51
RTL9Q8NET4 AC023424.1-201ENST00000496058 459 ntBASIC5.65□□□□□ -1.51
RTL9Q8NET4 SLC25A15P5-201ENST00000508033 253 ntBASIC5.65□□□□□ -1.51
RTL9Q8NET4 MTCO1P35-201ENST00000515270 228 ntBASIC5.65□□□□□ -1.51
RTL9Q8NET4 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.65□□□□□ -1.51
RTL9Q8NET4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
RTL9Q8NET4 AC015912.2-201ENST00000571053 181 ntBASIC5.65□□□□□ -1.51
RTL9Q8NET4 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.65□□□□□ -1.51
RTL9Q8NET4 VN1R85P-201ENST00000601587 426 ntBASIC5.65□□□□□ -1.51
RTL9Q8NET4 AC023762.1-201ENST00000603280 584 ntBASIC5.65□□□□□ -1.51
RTL9Q8NET4 OR51C1P-201ENST00000608504 942 ntBASIC5.65□□□□□ -1.51
RTL9Q8NET4 AC024941.1-201ENST00000612250 334 ntBASIC5.65□□□□□ -1.51
RTL9Q8NET4 AC015804.1-201ENST00000622935 435 ntBASIC5.65□□□□□ -1.51
RTL9Q8NET4 AP000843.1-201ENST00000624880 701 ntBASIC5.65□□□□□ -1.51
RTL9Q8NET4 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.65□□□□□ -1.51
RTL9Q8NET4 AL359922.3-201ENST00000624779 1670 ntBASIC5.65□□□□□ -1.51
RTL9Q8NET4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.65□□□□□ -1.51
RTL9Q8NET4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
RTL9Q8NET4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.64□□□□□ -1.51
RTL9Q8NET4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RTL9Q8NET4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RTL9Q8NET4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RTL9Q8NET4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RTL9Q8NET4 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RTL9Q8NET4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RTL9Q8NET4 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.64□□□□□ -1.51
RTL9Q8NET4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.64□□□□□ -1.51
RTL9Q8NET4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.64□□□□□ -1.51
RTL9Q8NET4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.64□□□□□ -1.51
RTL9Q8NET4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RTL9Q8NET4 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.64□□□□□ -1.51
RTL9Q8NET4 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.64□□□□□ -1.51
RTL9Q8NET4 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.64□□□□□ -1.51
RTL9Q8NET4 AC106785.1-201ENST00000565935 262 ntBASIC5.64□□□□□ -1.51
RTL9Q8NET4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.64□□□□□ -1.51
RTL9Q8NET4 AC011477.5-201ENST00000586571 259 ntBASIC5.64□□□□□ -1.51
RTL9Q8NET4 ARF4P1-201ENST00000605447 541 ntBASIC5.64□□□□□ -1.51
RTL9Q8NET4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RTL9Q8NET4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RTL9Q8NET4 AP005435.3-201ENST00000531260 3198 ntBASIC5.63□□□□□ -1.51
RTL9Q8NET4 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTL9Q8NET4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTL9Q8NET4 AL391684.1-202ENST00000641293 1636 ntBASIC5.63□□□□□ -1.51
RTL9Q8NET4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTL9Q8NET4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTL9Q8NET4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTL9Q8NET4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.63□□□□□ -1.51
RTL9Q8NET4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTL9Q8NET4 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RTL9Q8NET4 RNU1-130P-201ENST00000363930 160 ntBASIC5.63□□□□□ -1.51
RTL9Q8NET4 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.63□□□□□ -1.51
RTL9Q8NET4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.63□□□□□ -1.51
RTL9Q8NET4 RPL23AP43-201ENST00000446445 471 ntBASIC5.63□□□□□ -1.51
RTL9Q8NET4 RN7SL98P-201ENST00000462271 300 ntBASIC5.63□□□□□ -1.51
RTL9Q8NET4 RN7SL303P-201ENST00000469773 251 ntBASIC5.63□□□□□ -1.51
RTL9Q8NET4 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RTL9Q8NET4 RPS27AP16-201ENST00000492222 470 ntBASIC5.63□□□□□ -1.51
RTL9Q8NET4 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.63□□□□□ -1.51
RTL9Q8NET4 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.63□□□□□ -1.51
RTL9Q8NET4 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.63□□□□□ -1.51
RTL9Q8NET4 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.63□□□□□ -1.51
RTL9Q8NET4 RNA5SP249-201ENST00000516127 99 ntBASIC5.63□□□□□ -1.51
RTL9Q8NET4 AC010476.1-201ENST00000519111 851 ntBASIC5.63□□□□□ -1.51
RTL9Q8NET4 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.63□□□□□ -1.51
RTL9Q8NET4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.63□□□□□ -1.51
RTL9Q8NET4 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.63□□□□□ -1.51
RTL9Q8NET4 ZYXP1-201ENST00000617638 118 ntBASIC5.63□□□□□ -1.51
RTL9Q8NET4 MIR6891-201ENST00000618788 93 ntBASIC5.63□□□□□ -1.51
RTL9Q8NET4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTL9Q8NET4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTL9Q8NET4 STX3-208ENST00000641815 3236 ntBASIC5.63□□□□□ -1.51
RTL9Q8NET4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTL9Q8NET4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.63□□□□□ -1.51
RTL9Q8NET4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.62□□□□□ -1.51
RTL9Q8NET4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms