Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RNU6-1308P-201ENST00000516817 103 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 NDUFS5P6-201ENST00000529136 295 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 AC009643.1-201ENST00000532030 391 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 DUX4L52-201ENST00000549363 777 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 AC087897.1-201ENST00000550134 156 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 UBE2FP2-201ENST00000566646 462 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 AC114878.2-201ENST00000604863 1251 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 AC068724.3-201ENST00000625906 87 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 AL731532.1-201ENST00000623972 4236 ntBASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SMC1BQ8NDV3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC011503.2-201ENST00000594230 1500 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC004656.1-201ENST00000568479 4951 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 RNU6-932P-201ENST00000391108 106 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AL049545.1-201ENST00000401856 572 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 OR2X1P-201ENST00000421144 687 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 HSPE1P16-201ENST00000426640 348 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC004975.1-201ENST00000428733 208 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 FO393419.3-201ENST00000428741 282 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 GSTM5P1-201ENST00000434751 660 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC097499.1-201ENST00000444277 208 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 RNA5SP303-201ENST00000516192 130 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC104417.1-201ENST00000523974 751 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC125494.2-201ENST00000602431 657 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC103792.1-201ENST00000603591 919 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC009597.2-201ENST00000604659 592 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC024060.1-201ENST00000607052 494 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 MIR92B-201ENST00000607575 96 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AL158062.1-201ENST00000619632 745 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AP003485.2-201ENST00000623636 610 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC079416.3-201ENST00000624479 549 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 AC015799.1-201ENST00000622996 3122 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 PWAR1-201ENST00000624188 2414 ntBASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SMC1BQ8NDV3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AL137141.1-201ENST00000624622 4836 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AOX3P-204ENST00000491025 2107 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AL121839.2-201ENST00000565058 6943 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 RN7SKP95-201ENST00000362860 303 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 RNU4-68P-201ENST00000364314 141 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 SNORA16A-201ENST00000384342 137 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 DNAJC19P6-201ENST00000401853 280 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 RPS26P38-201ENST00000414476 348 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 AL590806.1-201ENST00000415818 853 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 MTCO3P4-201ENST00000419236 787 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 RPS4XP16-201ENST00000427198 791 ntBASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.49□□□□□ -1.37
SMC1BQ8NDV3 HIGD1AP4-201ENST00000430194 280 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms