Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC097063.1-201ENST00000426714 1797 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 RNU6-452P-201ENST00000384406 107 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 RNU6-796P-201ENST00000391086 107 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC097499.1-201ENST00000444277 208 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC112498.1-201ENST00000444401 332 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 HMGN1P5-201ENST00000448591 263 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 RNU7-27P-201ENST00000459281 62 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 ATP5G1P3-201ENST00000463301 410 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 CYCSP20-201ENST00000473154 315 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 RN7SL244P-201ENST00000493405 297 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 COX6B1P5-201ENST00000509843 249 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 MTCO3P27-201ENST00000514397 196 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 OR7E128P-201ENST00000532736 1024 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC087894.1-201ENST00000538359 518 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC008083.2-201ENST00000546707 476 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC074050.1-201ENST00000563247 211 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC126365.2-201ENST00000580630 379 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC068620.3-201ENST00000602749 560 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 BNIP3P35-201ENST00000604530 490 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC105148.1-201ENST00000604961 409 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC078880.5-201ENST00000617845 421 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC007342.8-201ENST00000623278 678 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC016717.3-201ENST00000624730 554 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.63□□□□□ -1.51
HERC6Q8IVU3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.63□□□□□ -1.51
HERC6Q8IVU3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC006206.1-201ENST00000544842 3387 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 GVINP1-202ENST00000531871 7271 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 RPL32P3-201ENST00000359025 275 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 RNU6-185P-201ENST00000384421 107 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 GLULP6-201ENST00000399502 913 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 RPS27AP11-201ENST00000402798 447 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 RN7SKP114-201ENST00000410327 279 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 MTND2P15-201ENST00000418575 892 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 RPS29P10-201ENST00000439197 166 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC012512.1-201ENST00000446594 718 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC083899.1-201ENST00000454465 3819 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 FCF1P6-201ENST00000456841 595 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC079168.1-201ENST00000458741 345 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 RPS17P11-201ENST00000474297 293 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 NAMPTP2-201ENST00000505629 1115 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 AC119751.4-201ENST00000507498 357 ntBASIC5.62□□□□□ -1.51
HERC6Q8IVU3 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.62□□□□□ -1.51
HERC6Q8IVU3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms