Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 MTCYBP19-201ENST00000517463 1124 ntBASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 GCSHP4-201ENST00000538792 439 ntBASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 AC074029.2-201ENST00000551045 634 ntBASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 BGLT3-201ENST00000564523 994 ntBASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 SNORA74C-1-201ENST00000580726 201 ntBASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 AC010424.2-201ENST00000607594 443 ntBASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 BX323046.1-201ENST00000610145 535 ntBASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 AC009032.1-201ENST00000617574 431 ntBASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LDLRAP1Q5SW96 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LDLRAP1Q5SW96 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.84□□□□□ -1.64
LDLRAP1Q5SW96 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LDLRAP1Q5SW96 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 IRF5P1-201ENST00000504852 2164 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AC114755.2-201ENST00000413520 361 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AC006065.1-201ENST00000422539 802 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AC007559.1-201ENST00000428736 355 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AL606490.8-201ENST00000441624 319 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 RPL31P44-201ENST00000447680 377 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AL591363.1-201ENST00000450091 483 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 RPL23AP56-201ENST00000460778 453 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 RNA5SP303-201ENST00000516192 130 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AC026688.1-201ENST00000520639 1168 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AL049830.4-201ENST00000555149 351 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 OR1F2P-201ENST00000570470 933 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 MIR3934-201ENST00000579806 107 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AC068020.1-201ENST00000594215 661 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AC130352.1-201ENST00000602979 661 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AL137072.1-201ENST00000603444 466 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AC023813.4-201ENST00000607580 580 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 AC135803.1-201ENST00000608748 565 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 SALL4P2-201ENST00000423288 2910 ntBASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.83□□□□□ -1.64
LDLRAP1Q5SW96 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 BMS1P3-201ENST00000372011 932 ntBASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 MIR550A3-201ENST00000390735 95 ntBASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 AL133270.1-201ENST00000402635 279 ntBASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 AL445528.1-201ENST00000426330 420 ntBASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 OR52J1P-201ENST00000450596 932 ntBASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 AC234781.3-201ENST00000452540 973 ntBASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 AC096741.1-201ENST00000472250 846 ntBASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.82□□□□□ -1.64
LDLRAP1Q5SW96 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms