Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
LRRK2Q5S007 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LRRK2Q5S007 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LRRK2Q5S007 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRRK2Q5S007 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
LRRK2Q5S007 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
LRRK2Q5S007 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LRRK2Q5S007 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LRRK2Q5S007 GAPDHP14-201ENST00000450472 937 ntBASIC3.98□□□□□ -1.77
LRRK2Q5S007 AC026427.2-201ENST00000506228 536 ntBASIC3.98□□□□□ -1.77
LRRK2Q5S007 RN7SKP157-201ENST00000516174 282 ntBASIC3.98□□□□□ -1.77
LRRK2Q5S007 NDUFB4P11-201ENST00000560510 395 ntBASIC3.98□□□□□ -1.77
LRRK2Q5S007 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.98□□□□□ -1.77
LRRK2Q5S007 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.98□□□□□ -1.77
LRRK2Q5S007 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
LRRK2Q5S007 AC069542.2-201ENST00000624816 216 ntBASIC3.98□□□□□ -1.77
LRRK2Q5S007 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LRRK2Q5S007 AC092162.3-201ENST00000624511 1624 ntBASIC3.98□□□□□ -1.77
LRRK2Q5S007 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.98□□□□□ -1.77
LRRK2Q5S007 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
LRRK2Q5S007 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
LRRK2Q5S007 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC3.97□□□□□ -1.77
LRRK2Q5S007 AL162151.2-201ENST00000448875 158 ntBASIC3.97□□□□□ -1.77
LRRK2Q5S007 AL592156.1-201ENST00000508758 304 ntBASIC3.97□□□□□ -1.77
LRRK2Q5S007 IMPA1P1-201ENST00000510718 842 ntBASIC3.97□□□□□ -1.77
LRRK2Q5S007 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LRRK2Q5S007 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.97□□□□□ -1.77
LRRK2Q5S007 AL357559.1-201ENST00000622228 274 ntBASIC3.97□□□□□ -1.77
LRRK2Q5S007 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRK2Q5S007 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRK2Q5S007 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
LRRK2Q5S007 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRK2Q5S007 ZNF285B-201ENST00000561698 1767 ntBASIC3.97□□□□□ -1.77
LRRK2Q5S007 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRK2Q5S007 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC3.97□□□□□ -1.77
LRRK2Q5S007 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC3.97□□□□□ -1.77
LRRK2Q5S007 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRK2Q5S007 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LRRK2Q5S007 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRK2Q5S007 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.97□□□□□ -1.77
LRRK2Q5S007 RNU6-709P-201ENST00000517257 104 ntBASIC3.97□□□□□ -1.77
LRRK2Q5S007 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.97□□□□□ -1.77
LRRK2Q5S007 AC084824.2-201ENST00000548906 345 ntBASIC3.97□□□□□ -1.77
LRRK2Q5S007 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRK2Q5S007 RN7SL600P-201ENST00000581811 299 ntBASIC3.97□□□□□ -1.77
LRRK2Q5S007 SNORA51-201ENST00000606420 132 ntBASIC3.97□□□□□ -1.77
LRRK2Q5S007 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRK2Q5S007 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LRRK2Q5S007 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRK2Q5S007 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRK2Q5S007 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRK2Q5S007 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRK2Q5S007 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRK2Q5S007 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRK2Q5S007 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRK2Q5S007 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.96□□□□□ -1.77
LRRK2Q5S007 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
LRRK2Q5S007 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
LRRK2Q5S007 AC096664.2-201ENST00000411843 406 ntBASIC3.96□□□□□ -1.77
LRRK2Q5S007 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.96□□□□□ -1.77
LRRK2Q5S007 AC007688.1-201ENST00000475592 759 ntBASIC3.96□□□□□ -1.77
LRRK2Q5S007 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.96□□□□□ -1.77
LRRK2Q5S007 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.96□□□□□ -1.77
LRRK2Q5S007 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
LRRK2Q5S007 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
LRRK2Q5S007 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.96□□□□□ -1.77
LRRK2Q5S007 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.96□□□□□ -1.77
LRRK2Q5S007 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
LRRK2Q5S007 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRRK2Q5S007 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRRK2Q5S007 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRRK2Q5S007 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRRK2Q5S007 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC3.96□□□□□ -1.78
LRRK2Q5S007 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRRK2Q5S007 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC3.96□□□□□ -1.78
LRRK2Q5S007 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
LRRK2Q5S007 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC3.96□□□□□ -1.78
LRRK2Q5S007 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRRK2Q5S007 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.96□□□□□ -1.78
LRRK2Q5S007 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
LRRK2Q5S007 RNA5SP513-201ENST00000364648 118 ntBASIC3.96□□□□□ -1.78
LRRK2Q5S007 AP000907.1-201ENST00000428428 510 ntBASIC3.96□□□□□ -1.78
LRRK2Q5S007 AL451139.1-201ENST00000434718 346 ntBASIC3.96□□□□□ -1.78
LRRK2Q5S007 AC073052.1-201ENST00000440417 714 ntBASIC3.96□□□□□ -1.78
LRRK2Q5S007 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
LRRK2Q5S007 AC096553.1-201ENST00000605169 829 ntBASIC3.96□□□□□ -1.78
LRRK2Q5S007 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRRK2Q5S007 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
LRRK2Q5S007 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRRK2Q5S007 BCORP1-203ENST00000513194 5093 ntBASIC3.96□□□□□ -1.78
LRRK2Q5S007 AC004817.4-201ENST00000602396 3625 ntBASIC3.96□□□□□ -1.78
LRRK2Q5S007 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.96□□□□□ -1.78
LRRK2Q5S007 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
LRRK2Q5S007 AC006206.1-201ENST00000544842 3387 ntBASIC3.95□□□□□ -1.78
LRRK2Q5S007 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.95□□□□□ -1.78
LRRK2Q5S007 MIR34B-201ENST00000385076 84 ntBASIC3.95□□□□□ -1.78
LRRK2Q5S007 AC007068.1-201ENST00000396690 844 ntBASIC3.95□□□□□ -1.78
LRRK2Q5S007 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.95□□□□□ -1.78
LRRK2Q5S007 RPL23AP38-201ENST00000423801 469 ntBASIC3.95□□□□□ -1.78
LRRK2Q5S007 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms