Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGCS1Q01581 AC098799.3-201ENST00000506095 438 ntBASIC4.45□□□□□ -1.7
HMGCS1Q01581 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 RNU2-30P-201ENST00000516209 141 ntBASIC4.45□□□□□ -1.7
HMGCS1Q01581 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 AC105129.1-201ENST00000560250 297 ntBASIC4.45□□□□□ -1.7
HMGCS1Q01581 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 AC124856.1-201ENST00000600819 896 ntBASIC4.45□□□□□ -1.7
HMGCS1Q01581 AL031320.1-201ENST00000604177 357 ntBASIC4.45□□□□□ -1.7
HMGCS1Q01581 AL391358.1-201ENST00000605342 190 ntBASIC4.45□□□□□ -1.7
HMGCS1Q01581 AC096586.2-201ENST00000610260 441 ntBASIC4.45□□□□□ -1.7
HMGCS1Q01581 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 AC140113.4-201ENST00000622087 222 ntBASIC4.45□□□□□ -1.7
HMGCS1Q01581 AC004232.3-201ENST00000622977 525 ntBASIC4.45□□□□□ -1.7
HMGCS1Q01581 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGCS1Q01581 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 AP001002.1-201ENST00000625148 1513 ntBASIC4.45□□□□□ -1.7
HMGCS1Q01581 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGCS1Q01581 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HMGCS1Q01581 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGCS1Q01581 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGCS1Q01581 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGCS1Q01581 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGCS1Q01581 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 CASC19-204ENST00000641001 2055 ntBASIC4.44□□□□□ -1.7
HMGCS1Q01581 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGCS1Q01581 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGCS1Q01581 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGCS1Q01581 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 RNA5SP113-201ENST00000410486 84 ntBASIC4.44□□□□□ -1.7
HMGCS1Q01581 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 TMX2P1-201ENST00000436507 708 ntBASIC4.44□□□□□ -1.7
HMGCS1Q01581 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 ATP5G1P3-201ENST00000463301 410 ntBASIC4.44□□□□□ -1.7
HMGCS1Q01581 DEFB109F-201ENST00000491870 277 ntBASIC4.44□□□□□ -1.7
HMGCS1Q01581 RPL36AP41-201ENST00000493820 306 ntBASIC4.44□□□□□ -1.7
HMGCS1Q01581 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 MTCO3P42-201ENST00000509488 518 ntBASIC4.44□□□□□ -1.7
HMGCS1Q01581 MTCO3P39-201ENST00000514812 518 ntBASIC4.44□□□□□ -1.7
HMGCS1Q01581 RNA5SP446-201ENST00000515955 82 ntBASIC4.44□□□□□ -1.7
HMGCS1Q01581 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 AC018442.3-201ENST00000523025 183 ntBASIC4.44□□□□□ -1.7
HMGCS1Q01581 AP001804.2-201ENST00000533932 910 ntBASIC4.44□□□□□ -1.7
HMGCS1Q01581 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 ATP5J2P6-201ENST00000565203 266 ntBASIC4.44□□□□□ -1.7
HMGCS1Q01581 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 FAM25E-202ENST00000608562 189 ntBASIC4.44□□□□□ -1.7
HMGCS1Q01581 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGCS1Q01581 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 SYT14P1-202ENST00000600441 1448 ntBASIC4.44□□□□□ -1.7
HMGCS1Q01581 EOGT-210ENST00000615922 1931 ntBASIC4.44□□□□□ -1.7
HMGCS1Q01581 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGCS1Q01581 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGCS1Q01581 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGCS1Q01581 AC132825.1-201ENST00000463573 2247 ntBASIC4.44□□□□□ -1.7
HMGCS1Q01581 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGCS1Q01581 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMGCS1Q01581 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMGCS1Q01581 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMGCS1Q01581 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMGCS1Q01581 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMGCS1Q01581 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
HMGCS1Q01581 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.43□□□□□ -1.7
HMGCS1Q01581 RN7SKP115-201ENST00000363177 317 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMGCS1Q01581 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGCS1Q01581 RN7SKP199-201ENST00000410325 305 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 RN7SKP97-201ENST00000410966 333 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.43□□□□□ -1.7
HMGCS1Q01581 OR51A6P-201ENST00000418680 1004 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 AC140479.3-201ENST00000418944 1126 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMGCS1Q01581 AL450263.2-201ENST00000439400 589 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGCS1Q01581 AL935212.3-201ENST00000450729 284 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGCS1Q01581 AC091685.2-201ENST00000454924 864 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 RPL35AP28-201ENST00000459730 331 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGCS1Q01581 AP000942.1-201ENST00000463969 747 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 AC092324.1-201ENST00000468671 324 ntBASIC4.43□□□□□ -1.7
HMGCS1Q01581 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
HMGCS1Q01581 NPM1P29-201ENST00000483112 803 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms