Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN2P57739 AP001153.1-201ENST00000641024 338 ntBASIC5.06□□□□□ -1.6
CLDN2P57739 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CLDN2P57739 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN2P57739 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN2P57739 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN2P57739 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN2P57739 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN2P57739 MTCO1P15-201ENST00000529569 1526 ntBASIC5.06□□□□□ -1.6
CLDN2P57739 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN2P57739 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CLDN2P57739 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN2P57739 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN2P57739 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CLDN2P57739 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN2P57739 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CLDN2P57739 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN2P57739 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN2P57739 AC016745.2-201ENST00000608834 3443 ntBASIC5.06□□□□□ -1.6
CLDN2P57739 MTCO1P18-201ENST00000455518 1419 ntBASIC5.06□□□□□ -1.6
CLDN2P57739 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN2P57739 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CLDN2P57739 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CLDN2P57739 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CLDN2P57739 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN2P57739 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
CLDN2P57739 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CLDN2P57739 MIR142-201ENST00000384835 87 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 RNU6-244P-201ENST00000391028 104 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 AL445213.1-201ENST00000412589 747 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.05□□□□□ -1.6
CLDN2P57739 AC023128.2-201ENST00000420880 1223 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN2P57739 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN2P57739 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN2P57739 DPY19L1P2-201ENST00000426647 915 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.05□□□□□ -1.6
CLDN2P57739 FABP7P2-201ENST00000429946 379 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.05□□□□□ -1.6
CLDN2P57739 AC008072.1-201ENST00000434254 824 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN2P57739 AC073648.4-201ENST00000442655 781 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN2P57739 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN2P57739 AL096803.2-201ENST00000450032 677 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN2P57739 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN2P57739 AC104164.3-201ENST00000467363 1258 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 AC092324.1-201ENST00000468671 324 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 AC128716.1-201ENST00000475129 166 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN2P57739 AC037198.2-201ENST00000478845 733 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 RN7SL814P-201ENST00000487715 300 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 RPS12P31-201ENST00000491419 398 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CLDN2P57739 UBE2V1P12-201ENST00000503954 474 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 AC097173.1-201ENST00000505862 819 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 ASNSP4-201ENST00000511103 447 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 RNA5SP228-201ENST00000516232 133 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 RNA5SP43-201ENST00000516559 110 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.05□□□□□ -1.6
CLDN2P57739 OR7E13P-201ENST00000526052 910 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN2P57739 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN2P57739 AL390726.5-202ENST00000564800 256 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN2P57739 AL606834.3-201ENST00000602615 496 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN2P57739 MIR6820-201ENST00000611508 62 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN2P57739 AP001002.2-201ENST00000625137 386 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 AL590396.4-201ENST00000636779 956 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN2P57739 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CLDN2P57739 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CLDN2P57739 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 AL450345.1-202ENST00000605741 3881 ntBASIC5.05□□□□□ -1.6
CLDN2P57739 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CLDN2P57739 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.05□□□□□ -1.6
CLDN2P57739 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN2P57739 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN2P57739 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms