Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN20P56880 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN20P56880 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
CLDN20P56880 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN20P56880 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN20P56880 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN20P56880 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CLDN20P56880 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN20P56880 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN20P56880 AL138820.1-201ENST00000617901 5305 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN20P56880 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN20P56880 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN20P56880 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.76□□□□□ -1.65
CLDN20P56880 RNU6-666P-201ENST00000363499 107 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 RNU5B-4P-201ENST00000363508 111 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 RNU1-146P-201ENST00000364015 165 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN20P56880 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN20P56880 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN20P56880 RNU6-532P-201ENST00000384318 107 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 RNU6-244P-201ENST00000391028 104 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN20P56880 AL078599.1-201ENST00000402075 293 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 RPL5P19-201ENST00000404228 893 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 AL136131.1-201ENST00000406079 803 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 DUTP5-201ENST00000406790 469 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 BMS1P13-201ENST00000417301 885 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN20P56880 LINC01347-201ENST00000417964 355 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN20P56880 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN20P56880 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN20P56880 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN20P56880 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN20P56880 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN20P56880 AC092447.2-201ENST00000435487 669 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 FABP5P3-201ENST00000437960 408 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN20P56880 YWHAZP2-201ENST00000440317 728 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 RPL34P26-201ENST00000445636 354 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 AC092685.1-201ENST00000447960 1243 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN20P56880 AL591473.1-201ENST00000464297 313 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 AC005532.2-201ENST00000467154 373 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN20P56880 HMGB1P38-201ENST00000490557 577 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 RPS4XP20-201ENST00000505751 772 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 AC008638.1-201ENST00000506035 866 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 AC006499.3-201ENST00000506077 748 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN20P56880 AC118942.1-201ENST00000529674 1035 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 BNIP3P1-201ENST00000547295 580 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.76□□□□□ -1.65
CLDN20P56880 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN20P56880 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN20P56880 AC011374.2-201ENST00000607135 526 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN20P56880 AL139407.1-201ENST00000613826 1175 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 AC084824.4-201ENST00000620106 731 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN20P56880 AC132825.7-201ENST00000638744 335 ntBASIC4.76□□□□□ -1.65
CLDN20P56880 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN20P56880 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN20P56880 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN20P56880 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN20P56880 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CLDN20P56880 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN20P56880 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN20P56880 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN20P56880 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN20P56880 AC109780.1-201ENST00000451768 1344 ntBASIC4.75□□□□□ -1.65
CLDN20P56880 AL627171.1-201ENST00000618845 1308 ntBASIC4.75□□□□□ -1.65
CLDN20P56880 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN20P56880 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN20P56880 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
CLDN20P56880 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN20P56880 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN20P56880 RPL23P2-201ENST00000320371 421 ntBASIC4.75□□□□□ -1.65
CLDN20P56880 HMGB3P7-201ENST00000400214 611 ntBASIC4.75□□□□□ -1.65
CLDN20P56880 RNA5SP498-201ENST00000411342 120 ntBASIC4.75□□□□□ -1.65
CLDN20P56880 RN7SKP273-201ENST00000411392 314 ntBASIC4.75□□□□□ -1.65
CLDN20P56880 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN20P56880 AC007738.1-201ENST00000413892 348 ntBASIC4.75□□□□□ -1.65
CLDN20P56880 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN20P56880 AC023128.2-201ENST00000420880 1223 ntBASIC4.75□□□□□ -1.65
CLDN20P56880 OR2AH1P-201ENST00000425717 928 ntBASIC4.75□□□□□ -1.65
CLDN20P56880 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.75□□□□□ -1.65
CLDN20P56880 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.75□□□□□ -1.65
CLDN20P56880 FO393419.3-201ENST00000428741 282 ntBASIC4.75□□□□□ -1.65
CLDN20P56880 AC114973.1-201ENST00000429057 632 ntBASIC4.75□□□□□ -1.65
CLDN20P56880 CACYBPP1-201ENST00000438592 684 ntBASIC4.75□□□□□ -1.65
CLDN20P56880 ARF4P4-201ENST00000439608 520 ntBASIC4.75□□□□□ -1.65
CLDN20P56880 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN20P56880 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.75□□□□□ -1.65
CLDN20P56880 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.75□□□□□ -1.65
CLDN20P56880 AC097499.1-201ENST00000444277 208 ntBASIC4.75□□□□□ -1.65
CLDN20P56880 EEF1B2P5-201ENST00000444820 548 ntBASIC4.75□□□□□ -1.65
CLDN20P56880 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms