Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL445487.1-201ENST00000415694 1580 ntBASIC4.83□□□□□ -1.64
CDH4P55283 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH4P55283 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH4P55283 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH4P55283 AC079741.1-201ENST00000321498 212 ntBASIC4.83□□□□□ -1.64
CDH4P55283 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH4P55283 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH4P55283 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CDH4P55283 CYB5AP4-201ENST00000396692 399 ntBASIC4.83□□□□□ -1.64
CDH4P55283 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH4P55283 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH4P55283 AC019050.1-201ENST00000418508 492 ntBASIC4.83□□□□□ -1.64
CDH4P55283 ARAFP1-201ENST00000422172 605 ntBASIC4.83□□□□□ -1.64
CDH4P55283 RCC2P2-201ENST00000422174 918 ntBASIC4.83□□□□□ -1.64
CDH4P55283 RPL7P57-201ENST00000423238 740 ntBASIC4.83□□□□□ -1.64
CDH4P55283 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH4P55283 TMX2P1-201ENST00000436507 708 ntBASIC4.83□□□□□ -1.64
CDH4P55283 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH4P55283 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH4P55283 SEPT7P6-201ENST00000469999 1143 ntBASIC4.83□□□□□ -1.64
CDH4P55283 RN7SL346P-201ENST00000491561 294 ntBASIC4.83□□□□□ -1.64
CDH4P55283 HMGB3P16-201ENST00000508037 287 ntBASIC4.83□□□□□ -1.64
CDH4P55283 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH4P55283 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH4P55283 OR5M2P-201ENST00000529003 936 ntBASIC4.83□□□□□ -1.64
CDH4P55283 AP006289.1-201ENST00000538089 277 ntBASIC4.83□□□□□ -1.64
CDH4P55283 BNIP3P1-201ENST00000547295 580 ntBASIC4.83□□□□□ -1.64
CDH4P55283 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDH4P55283 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH4P55283 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH4P55283 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDH4P55283 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH4P55283 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH4P55283 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CDH4P55283 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH4P55283 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH4P55283 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH4P55283 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH4P55283 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH4P55283 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH4P55283 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH4P55283 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH4P55283 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH4P55283 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH4P55283 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH4P55283 AC093775.1-201ENST00000624154 1868 ntBASIC4.82□□□□□ -1.64
CDH4P55283 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH4P55283 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH4P55283 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CDH4P55283 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH4P55283 MIR192-201ENST00000384915 110 ntBASIC4.82□□□□□ -1.64
CDH4P55283 RPS16P5-201ENST00000406501 404 ntBASIC4.82□□□□□ -1.64
CDH4P55283 RN7SKP106-201ENST00000410832 272 ntBASIC4.82□□□□□ -1.64
CDH4P55283 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH4P55283 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH4P55283 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH4P55283 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH4P55283 NMNAT1P2-201ENST00000435192 860 ntBASIC4.82□□□□□ -1.64
CDH4P55283 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH4P55283 AL138878.2-201ENST00000440581 1241 ntBASIC4.82□□□□□ -1.64
CDH4P55283 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH4P55283 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH4P55283 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH4P55283 RPS6P2-201ENST00000454208 705 ntBASIC4.82□□□□□ -1.64
CDH4P55283 AL133244.1-201ENST00000456007 258 ntBASIC4.82□□□□□ -1.64
CDH4P55283 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH4P55283 RPL12P20-201ENST00000475538 479 ntBASIC4.82□□□□□ -1.64
CDH4P55283 RPL21P6-201ENST00000479171 504 ntBASIC4.82□□□□□ -1.64
CDH4P55283 AC020890.1-201ENST00000491837 504 ntBASIC4.82□□□□□ -1.64
CDH4P55283 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDH4P55283 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH4P55283 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH4P55283 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.82□□□□□ -1.64
CDH4P55283 AC137768.1-201ENST00000549998 553 ntBASIC4.82□□□□□ -1.64
CDH4P55283 AC105129.1-201ENST00000560250 297 ntBASIC4.82□□□□□ -1.64
CDH4P55283 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH4P55283 ADAM3B-201ENST00000569937 840 ntBASIC4.82□□□□□ -1.64
CDH4P55283 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH4P55283 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH4P55283 AC015922.4-201ENST00000612568 690 ntBASIC4.82□□□□□ -1.64
CDH4P55283 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH4P55283 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH4P55283 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH4P55283 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH4P55283 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH4P55283 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH4P55283 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH4P55283 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH4P55283 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH4P55283 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
CDH4P55283 AL356317.1-201ENST00000396110 1436 ntBASIC4.81□□□□□ -1.64
CDH4P55283 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CDH4P55283 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDH4P55283 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH4P55283 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CDH4P55283 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH4P55283 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH4P55283 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH4P55283 Z98745.1-201ENST00000402553 494 ntBASIC4.81□□□□□ -1.64
CDH4P55283 CTSL3P-202ENST00000412179 788 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms