Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 RNU2-50P-201ENST00000410494 143 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 AL591848.1-201ENST00000413092 322 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.61□□□□□ -1.67
SHMT2P34897 AL358176.3-201ENST00000420757 454 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 AL645608.4-201ENST00000423619 154 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.61□□□□□ -1.67
SHMT2P34897 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.61□□□□□ -1.67
SHMT2P34897 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.61□□□□□ -1.67
SHMT2P34897 ARAFP2-201ENST00000440565 559 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.61□□□□□ -1.67
SHMT2P34897 Z80107.2-201ENST00000445127 392 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 RPS6P2-201ENST00000454208 705 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 AC021146.3-201ENST00000511911 260 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.61□□□□□ -1.67
SHMT2P34897 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.61□□□□□ -1.67
SHMT2P34897 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.61□□□□□ -1.67
SHMT2P34897 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.61□□□□□ -1.67
SHMT2P34897 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SHMT2P34897 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.61□□□□□ -1.67
SHMT2P34897 AC093249.4-201ENST00000564755 259 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 RN7SL52P-201ENST00000584271 284 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.61□□□□□ -1.67
SHMT2P34897 AL137072.1-201ENST00000603444 466 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 AC098935.2-201ENST00000604222 466 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 AC097505.1-201ENST00000610199 565 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 AL161616.1-201ENST00000611867 286 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 AC005086.4-201ENST00000623065 213 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.61□□□□□ -1.67
SHMT2P34897 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.61□□□□□ -1.67
SHMT2P34897 DDX18P4-201ENST00000511690 1966 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.61□□□□□ -1.67
SHMT2P34897 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHMT2P34897 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHMT2P34897 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHMT2P34897 AL359922.3-201ENST00000624779 1670 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SHMT2P34897 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SHMT2P34897 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHMT2P34897 AL136164.3-201ENST00000624429 3978 ntBASIC4.6□□□□□ -1.67
SHMT2P34897 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.6□□□□□ -1.67
SHMT2P34897 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHMT2P34897 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHMT2P34897 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SHMT2P34897 MIR585-201ENST00000384887 94 ntBASIC4.6□□□□□ -1.67
SHMT2P34897 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SHMT2P34897 RNU1-82P-201ENST00000390851 165 ntBASIC4.6□□□□□ -1.67
SHMT2P34897 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHMT2P34897 RN7SKP267-201ENST00000410381 285 ntBASIC4.6□□□□□ -1.67
SHMT2P34897 GLUD1P9-201ENST00000420997 1173 ntBASIC4.6□□□□□ -1.67
SHMT2P34897 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.6□□□□□ -1.67
SHMT2P34897 RGS17P1-201ENST00000423358 553 ntBASIC4.6□□□□□ -1.67
SHMT2P34897 AC092447.2-201ENST00000435487 669 ntBASIC4.6□□□□□ -1.67
SHMT2P34897 CYCSP11-201ENST00000436426 315 ntBASIC4.6□□□□□ -1.67
SHMT2P34897 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.6□□□□□ -1.67
SHMT2P34897 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.6□□□□□ -1.67
SHMT2P34897 TDGF1P1-201ENST00000445734 527 ntBASIC4.6□□□□□ -1.67
SHMT2P34897 OR6C72P-201ENST00000451403 892 ntBASIC4.6□□□□□ -1.67
SHMT2P34897 RNU2-30P-201ENST00000516209 141 ntBASIC4.6□□□□□ -1.67
SHMT2P34897 TRAV11-201ENST00000539512 339 ntBASIC4.6□□□□□ -1.67
SHMT2P34897 AL110118.1-201ENST00000553543 400 ntBASIC4.6□□□□□ -1.67
SHMT2P34897 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.6□□□□□ -1.67
SHMT2P34897 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.6□□□□□ -1.67
SHMT2P34897 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.6□□□□□ -1.67
SHMT2P34897 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.6□□□□□ -1.67
SHMT2P34897 AC138473.1-201ENST00000605717 526 ntBASIC4.6□□□□□ -1.67
SHMT2P34897 AC020763.5-201ENST00000623298 430 ntBASIC4.6□□□□□ -1.67
SHMT2P34897 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.6□□□□□ -1.67
SHMT2P34897 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHMT2P34897 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.6□□□□□ -1.67
SHMT2P34897 Z95327.2-201ENST00000414579 1873 ntBASIC4.6□□□□□ -1.67
SHMT2P34897 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SHMT2P34897 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHMT2P34897 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SHMT2P34897 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
SHMT2P34897 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.59□□□□□ -1.67
SHMT2P34897 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SHMT2P34897 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
SHMT2P34897 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
SHMT2P34897 IL6STP1-201ENST00000346911 1020 ntBASIC4.59□□□□□ -1.67
SHMT2P34897 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHMT2P34897 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.59□□□□□ -1.67
SHMT2P34897 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.59□□□□□ -1.67
SHMT2P34897 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.59□□□□□ -1.67
SHMT2P34897 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
SHMT2P34897 NMNAT1P2-201ENST00000435192 860 ntBASIC4.59□□□□□ -1.67
SHMT2P34897 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.59□□□□□ -1.67
SHMT2P34897 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.59□□□□□ -1.67
SHMT2P34897 MRPL48P1-201ENST00000445390 636 ntBASIC4.59□□□□□ -1.67
SHMT2P34897 H2AFZP5-201ENST00000446960 382 ntBASIC4.59□□□□□ -1.67
SHMT2P34897 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.59□□□□□ -1.67
SHMT2P34897 RPL23AP37-201ENST00000479658 549 ntBASIC4.59□□□□□ -1.67
SHMT2P34897 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SHMT2P34897 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SHMT2P34897 RPS4XP18-201ENST00000495480 763 ntBASIC4.59□□□□□ -1.67
SHMT2P34897 AC025164.1-201ENST00000496249 478 ntBASIC4.59□□□□□ -1.67
SHMT2P34897 RPS27AP18-201ENST00000515536 459 ntBASIC4.59□□□□□ -1.67
SHMT2P34897 CDH12P4-201ENST00000517835 295 ntBASIC4.59□□□□□ -1.67
SHMT2P34897 CDH12P3-201ENST00000517935 295 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms