Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA3P32297 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CHRNA3P32297 AC139713.2-215ENST00000641428 5037 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA3P32297 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CHRNA3P32297 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CHRNA3P32297 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA3P32297 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
CHRNA3P32297 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CHRNA3P32297 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA3P32297 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA3P32297 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA3P32297 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CHRNA3P32297 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CHRNA3P32297 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CHRNA3P32297 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.07□□□□□ -1.6
CHRNA3P32297 AL021331.1-201ENST00000402817 582 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 AF186996.5-201ENST00000418098 904 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 VN1R37P-201ENST00000419096 748 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 FABP7P1-201ENST00000424004 391 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.07□□□□□ -1.6
CHRNA3P32297 AC112498.1-201ENST00000444401 332 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.07□□□□□ -1.6
CHRNA3P32297 AC104629.2-201ENST00000468627 598 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.07□□□□□ -1.6
CHRNA3P32297 AC083982.1-201ENST00000485679 344 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.07□□□□□ -1.6
CHRNA3P32297 BTF3P13-201ENST00000513224 490 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 snoU109.6-201ENST00000516831 118 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.07□□□□□ -1.6
CHRNA3P32297 AC021006.3-201ENST00000530771 192 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.07□□□□□ -1.6
CHRNA3P32297 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.07□□□□□ -1.6
CHRNA3P32297 AC079075.1-201ENST00000559543 878 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.07□□□□□ -1.6
CHRNA3P32297 AC233702.9-201ENST00000581528 203 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 MIR4480-201ENST00000582492 71 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.07□□□□□ -1.6
CHRNA3P32297 AL137072.1-201ENST00000603444 466 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 AC005377.1-201ENST00000605126 456 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.07□□□□□ -1.6
CHRNA3P32297 AC100827.5-201ENST00000615883 426 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 AC019206.1-201ENST00000621938 425 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 AC091953.3-201ENST00000623220 236 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.07□□□□□ -1.6
CHRNA3P32297 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.07□□□□□ -1.6
CHRNA3P32297 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.07□□□□□ -1.6
CHRNA3P32297 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA3P32297 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA3P32297 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA3P32297 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CHRNA3P32297 SCN1A-220ENST00000641603 12506 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 AC008758.3-201ENST00000507003 1829 ntBASIC5.07□□□□□ -1.6
CHRNA3P32297 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA3P32297 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA3P32297 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CHRNA3P32297 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CHRNA3P32297 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA3P32297 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.06□□□□□ -1.6
CHRNA3P32297 AC007342.9-201ENST00000623877 1385 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA3P32297 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA3P32297 AC005332.5-201ENST00000591222 2919 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA3P32297 RN7SKP149-201ENST00000363008 344 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.06□□□□□ -1.6
CHRNA3P32297 MIR585-201ENST00000384887 94 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 AL607077.1-201ENST00000401718 499 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 RNU6-564P-201ENST00000410983 104 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 SETP15-201ENST00000412724 337 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.06□□□□□ -1.6
CHRNA3P32297 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRNA3P32297 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRNA3P32297 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.06□□□□□ -1.6
CHRNA3P32297 MTND2P2-201ENST00000434633 945 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 TXNP2-201ENST00000443918 295 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 Z80107.2-201ENST00000445127 392 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRNA3P32297 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRNA3P32297 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRNA3P32297 MTND3P6-201ENST00000485242 339 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 MRPS33P2-201ENST00000507850 322 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRNA3P32297 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.06□□□□□ -1.6
CHRNA3P32297 AL390334.1-201ENST00000556395 450 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 TVP23CP2-201ENST00000571473 623 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 SNORA74C-1-201ENST00000580726 201 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRNA3P32297 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRNA3P32297 AC084373.1-201ENST00000603311 235 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 BNIP3P7-201ENST00000605641 516 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 AC234782.5-201ENST00000617723 324 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 AC015804.1-201ENST00000622935 435 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 AP003499.2-201ENST00000624100 483 ntBASIC5.06□□□□□ -1.6
CHRNA3P32297 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms